KEGG   Exaiptasia diaphana (Aiptasia): 110249432
Entry
110249432         CDS       T05080                                 
Name
(RefSeq) polyadenylate-binding protein 4-like
  KO
K13126  polyadenylate-binding protein
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03015  mRNA surveillance pathway
epa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110249432
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110249432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:epa03019]
    110249432
   03041 Spliceosome [BR:epa03041]
    110249432
Messenger RNA biogenesis [BR:epa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     110249432
   mRNA cycle factors
    Stress granule specific factors
     110249432
Spliceosome [BR:epa03041]
 Complex C
  Other components
   Complex C specific factors
    110249432
SSDB
Motif
Pfam: RRM_1 PABP RRM_7 RRM_5 DUF6033
Other DBs
NCBI-GeneID: 110249432
NCBI-ProteinID: XP_020911661
Position
Unknown
AA seq 630 aa
MNTSAGPPNYPMASLYVGDLAPDVTEAMLYEKFSSAGPVLSIRVCRDMITRRSLGYAYVN
FQQPGNAERALDTMNFDPIKGRPCRIMWQQRDPSLRKSGVGNIFIKNLDRSIDNKSLYDT
FSAFGNILSCKIAVDDLGNPKGYGFVHFEHGEDAEKAIEKVDGMLLNDKKVFVTHWMSKK
ERAEKMGNQPKKFTNVYIKNFGEEMTEDMLKDLCGEAGKVVSLKIMTDDGGKGKGFGFIS
FENPDEAEKAVDLLNNKDTNSGRRMYAGRAKKKAERAAEVKAEFDKKRQERLNRFQGVNL
YIKNLDDDIDDVQLREEFAVYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNG
RILVSKPLYVALAQRKEERKAQLAAQHMQRVSGLRMHQAAGQQVGQIFSQTGGFYMPQLQ
QGTRPFFSPQMQQVRPRWNMQQQQQMRPGVPNVPSAGAVPRARGVRQVAPRGVGPQSGMP
QGVQGGGQRMQNVPMNQPPRMPAGPQIRQQQQQFKFTQATRNQPTGPGPMPGDQVHSIQI
PGQEPLLPTALATAPPQEAKQMLGERLFPLIQQTHPELAGKITGMLLEIDNAELLHMLES
REALNAKVDEAVNVLKAHQAKDAMAGEGQK
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgaatacctctgctggcccaccgaactaccctatggcgtcattgtacgttggtgattta
gctccagatgtaaccgaagcgatgctttacgagaaattcagctctgctggacctgttctg
tccattcgtgtttgccgtgatatgattacaagacgttctttgggctatgcttacgtgaac
ttccaacaaccgggcaacgccgaaagagcgcttgatacgatgaatttcgacccgatcaag
ggccgaccatgtaggatcatgtggcaacagcgagatccctcacttcgaaagtcaggtgta
ggaaacatctttatcaagaacttggacaggagcatcgataataagtctctctatgatacc
ttcagtgcttttgggaacatcctctcctgtaagatagctgtcgatgatcttggaaatcca
aaagggtatggcttcgtccatttcgagcacggcgaagatgctgagaaagccatcgaaaag
gtggatggcatgttgctgaacgacaaaaaagtcttcgtaacccactggatgtccaagaag
gaacgagcagagaaaatgggtaaccagcctaagaagttcacaaatgtctacatcaaaaac
tttggtgaagaaatgactgaagacatgctgaaagacttgtgtggtgaagcaggcaaggtt
gtgagtttgaagataatgacagacgatggtggaaagggaaaaggatttggttttattagc
tttgaaaatcctgatgaggctgagaaggcagttgacctgttgaataacaaagataccaat
agtggacgcaggatgtacgccggacgtgcaaaaaagaaggctgaaagagctgcagaagtg
aaagctgagtttgacaagaaaagacaagagcgtttgaaccgyttccaaggagtgaacctc
tacatcaagaaccttgatgacgacattgatgatgttcagttgagagaagagtttgctgtt
tatggaacaatctctagtgctaaagtcatgaaagatgataagggcaattctaaagggttt
ggatttgtttgtttctcatctcctgaagaggccaccaaggcagttacagagatgaatgga
agaatccttgtctccaagccactgtatgttgccctagcacagcgcaaagaggaaagaaag
gcccaactggctgcacagcatatgcagcgtgtttctggattgcgtatgcaccaggctgct
ggtcaacaagttggacagattttctctcagactggaggcttctacatgccccagcttcaa
cagggaacacgcccattcttcagtccccaaatgcaacaggttcgtccacgctggaatatg
caacagcaacagcaaatgcggcctggagtacccaacgttcctagtgcaggagcagtgcca
agggctcgaggtgtacgccaagttgcacccaggggagttggacctcagtctggtatgccr
caaggtgtgcaaggaggcggacagcgtatgcagaatgtccctatgaatcaacctccacga
atgccagctggaccacagattagacagcaacaacagcaatttaagttcacwcaggcaacc
cgcaatcagcccactggaccaggccctatgcctggagatcaagtacacagcatccaaatt
cctggtcaagaacctcttctccctacagcccttgctacagcccctccacaagaagcaaag
cagatgcttggagagcgcctcttccccctcattcagcagactcatccagaactcgctggt
aaaatcactggcatgttgttagaaatcgacaatgcagagttgttgcacatgttggagtcc
cgtgaggccctgaatgcwaaggtagatgaggctgtwaatgttctgaaggcacatcaagct
aaggatgccatggccggtgaaggacagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (121)   
   KEGG ORTHOLOGY (1)   
   RefGene (117)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (138)   

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