KEGG   Exaiptasia diaphana (Aiptasia): 110251946
Entry
110251946         CDS       T05080                                 
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]
Organism
epa  Exaiptasia diaphana (Aiptasia)
Brite
KEGG Orthology (KO) [BR:epa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:epa03041]
    110251946
Enzymes [BR:epa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110251946
Spliceosome [BR:epa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    110251946
SSDB
Motif
Pfam: YTH OB_NTP_bind HA2_C Helicase_C Ank_2 HA2_N Ank Ank_5 Ank_4 DEAD Ank_3 DUF505
Other DBs
NCBI-GeneID: 110251946
NCBI-ProteinID: XP_020914353
Position
Unknown
AA seq 1401 aa
MSQPCRIVCTQPRRISAISVAERVAVERGEKIAQTVGYQIRLESRVSPKTVLTYCTSGVL
LRTLMQADDSLSYVTHVIVDEIHERBRFADFLLITLREILAVNKKIKLILMSAALDVNLF
IEYFGNCPVVHVPGRCFEVKEIFLEDILGLTGYQNKGMKKHFKGDDKVRVLLDKSAKHIE
RLRIASSKTEEEKENDEKTKLDETEREAASTFPTQDNDQVDIEDVLPEDVGILLPEDDDI
IBDGDEDINTDNATDDVTDDITDDTTDDNSNDVNGDDDISNSGYDGNDEGDDIIIDDDDD
DDGDDESEGKNLAKETEAVNIXPKXEDSTNQTEDDEDEEDSYLRKEMDESISDAWLNGSE
DSFVQILHLIMNENISVDYQHSETQVTALMVAAGRGCTGVVEQLILLGANPNVKDPKNNW
TALDWAKKWEQSEVIEMLEAYIASPQTYCEDISLEKQSTELSDEAKELLEVYHKTFDDDR
VDLELILSLLNYICSLGKQGAVLXFLPGYDEIITLRDKLIANNSXFCNCFIRXQLXTLHS
CMQPAEQRKVFRKLPSNIRKIILSTNIAETSVTIDDVVFVIDSGKVKEKSFDALTSVSTL
HPVWISKASAIQRKGRAGRCSPGVCFHMFSHVRYESFQEYQVPEMLRTPLQELCLHTKLL
SGPNTSIAEFLAKAPEPPAYLILRNAVTFLKTIDALDNWEDLTDLGHHLADLPVEPRLGK
MILYSVILKCIDPVITIACALAYRDPFILPMYAGEKRLAALAKKRFIIDSFSDHLLFVKA
FRGWQRAKAEGYDKSYCQRNYLSPATLEMMSGMRSQMIGHLKSCGFIRPRGAGDMRDLNT
NSNNWAVVKXALCAGMYPNIVRIDRENHKLTTPKESKVRLHTSSIIYQQPEKQESMVNAQ
VKAVKKIPSDWLIYEEMTRMYTSVSIKCCTAVSPITISLFTGPSLSSPNLESGSKSRDQD
RRNSEGRVNSESSDSENEESKPGESRDNHVEMKVDDWISLSGNDETIHLTTYLRHKLQAL
FIRRIRSPSRPWSQVDEAIVRATVAVLSAEEEVINPNLYPKQRKPRQDYSSESRPRDDRP
RDRFSSPRDRLRDSPAPSWRTRQTNSPIPQASQRRTIESTSQPRSQAQLSDSEARYFIIK
CNNQRNLSISMAKGIWATTIANEKKLNRAFRECKKIVLIFSVQGSGHFQGFAHMASPIGK
DKSPEFGSSSLGGVFKVDWIKKANIPFQEAHHLVNPWNDHKKVQISRDGQELEPTVGADL
CKLWDAPVATPSQYSRPPLGSNRRGQRQIATQQDPNQWQQSPSPSPLTTNPXVYPPHXAS
LPIPVPVPAQHSHGTVMHRFPXQVMAGXQQPPIGYTAHPVPSMHTTNLGAVRYPGNVAGL
QFQQPPTPTGTAILRPNSYPS
NT seq 4206 nt   +upstreamnt  +downstreamnt
atgtcacaaccatgtcgtattgtgtgcacccaaccaagaagaatttctgcaatatctgtt
gctgaaagagttgcagtagaacgaggagagaaaattgctcagacagtgggctatcaaatt
agactggaaagcagagtgtctccaaagacagtacttacttactgtaccagtggggtcttg
ttgagaaccctgatgcaagctgatgattctctgtcctatgttactcatgtcattgtagat
gaaattcatgagaggratagatttgcagactttcttctgatcacattgcgtgaaattcta
gctgtcaacaagaaaatcaaactcattctgatgagtgctgctttggatgtcaacttgttc
attgaatactttggcaattgtccagtagttcatgttcctggtagatgttttgaagtgaag
gaaatattccttgaagacattcttggcttaacggggtaccagaacaaaggaatgaaaaag
catttcaaaggagacgataaagttcgtgttctgttggacaaaagtgcaaagcatattgaa
agactaagaattgcatcatcaaagactgaagaggaaaaggaaaatgatgagaaaactaaa
ttagatgaaacagagagggaggctgcatccacttttcctacacaggacaatgatcaagtt
gacattgaagacgttctcccagaagatgttggcattctactcccagaggatgatgacatc
attratgatggtgatgaggacattaacactgacaacgcaactgatgatgtcactgatgat
atcactgatgataccactgatgacaacagtaatgatgtcaatggcgacgatgacatttcc
aatagtggttatgatggaaatgatgagggtgatgatatcatcattgatgatgatgacgat
gatgatggtgatgatgagtctgagggcaagaatcttgcaaaggaaactgaggctgtcaac
attgrcccaaagyctgaagattctacaaatcaaactgaggatgacgaagatgaagaagat
tcataccttagaaaagagatggatgaaagcatctcagatgcatggctcaatgggagtgaa
gattcytttgtacagattcttcatttgattatgaatgaaaacattagtgtggactaccaa
cattcagaaacacaggtgacagcactwatggtkgctgctggtcgtggctgcacaggagtt
gtggaacagcttattctactgggagcaaatccaaatgtcaaagatccaaaaaataactgg
acagcactggattgggccaaaaagtgggagcaatcagaagtcattgaaatgcttgaagcc
tatattgcatcacctcagacatactgtgaagatatctcactagagaaacaatcaacagag
ttaagtgatgaagcaaaggaactacttgaagtttatcacaagacattcgatgatgacaga
gttgatctggagctaattctgagccttttgaattatatttgttcccttggaaaacaaggc
gctgtattartatttctaccaggatatgatgaaataataactttaagagataaacttatt
gctaacaattcawgtttttgtaattgtttcatcagatwtcagttgytcactcttcattca
tgtatgcagccagctgagcaaaggaaggtgtttagaaagttaccatccaatatccgtaaa
attatattgtcaacaaacatagctgaaactagtgtcactatagatgacgtagtgtttgtt
attgactctggcaaagttaaagagaaatcatttgatgccctaacatcagtatctacattg
catcctgtttggatatcaaaagccagtgcaatacagagaaagggaagggctggtcgttgt
tcccccggtgtatgttttcatatgttcagtcatgtacgytatgaaagcttccaggaatat
caagtacctgaaatgctacgcactcccctacaggaactttgtytacataccaagctactg
tcaggtccaaacacttctatagctgaattcctggccaaagcaccagaaccaccagcctat
ttgatactgcgcaatgctgtcacttttctaaagactatagacgctcttgacaactgggaa
gatttgactgacttaggtcatcatctagcagatttaccagtggaacctcggcttggtaaa
atgattctatactcagtgatactgaartgcattgatcctgttattactatcgcttgtgca
ttggcatatagagatcctttcattcttccaatgtatgccggagagaagcgtttagcagct
ttagccaagaagaggtttataattgactcctttagcgaccatcttctgtttgtaaaagct
ttcaggggctggcagcgagctaaagctgaaggttacgataaaagttattgtcagagaaac
tacttgtcaccagcwacactagaaatgatgtcaggaatgaggtctcaaatgattggtcat
ctcaagtcttgtggttttataagaccgcgtggagctggtgatatgagagacctgaacacc
aattcyaacaactgggctgttgtcaagkctgccctgtgtgctgggatgtatcctaatata
gtacggattgatcgagagaatcataaattaactacaccgaaagagtcyaaggttaggctg
cacacatcttcaatcatataccagcagccagaaaaacaagagagcatggttaatgcgcag
gtgaaagcagtcaagaagatcccttctgattggttgatctacgaggaaatgacaagaatg
tacacctcagtttccatcaagtgctgtacagcggtctcgccaataaccatcagcttgttc
actggaccaagtctatcctcgccaaatctggagtctggttccaagtcacgtgatcaggac
agacggaacagtgaggggcgtgtcaatagtgaaagtagtgatagtgaaaatgaagagagt
aaacccggtgagtcacgtgacaaccatgtcgaaatgaaggtcgatgattggatatcgctg
tcgggaaatgacgagactattcatttaactacttatctgagacacaagcttcaagcgttg
tttatcagacggatacgatctccttctcgtccatggtcacaagtagacgaagccattgtt
agggcaactgtagcagtgctatcagctgaagaggaagtcatcaacccgaacttatacccc
aaacagagaaaacctagacaagattacagcagcgagtcaagaccccgagatgacaggccg
cgggatcgtttctcttccccgagggatcgtcttcgggattcacccgccccaagttggaga
acgagacaaacaaactcaccaatcccacaggcatctcaaaggaggactattgaatcgacg
tcacagcctcgatctcaggctcagctttctgatagtgaagctcgttacttcattatcaag
tgtaacaatcaacgaaacctcagcatatcgatggcaaagggtatctgggccacgacgatt
gcaaatgagaaaaaactgaaccgcgcatttagagaatgtaaaaagattgtgcttattttc
tctgtgcaaggaagtggtcattttcaaggttttgcgcacatggcttctcccattggaaaa
gacaagtcacccgagtttggttccagttccctaggcggagtattcaaggtcgattggata
aaaaaagcgaatattccattccaagaagcgcatcatttagtgaatccatggaacgaccac
aagaaagttcagatcagtcgagatggccaggaactagagcccaccgttggcgcagacctg
tgtaaattatgggatgcaccagttgctacaccttcgcaatactcaagaccmcccttagga
agcaataggcgtggccaacgtcaaatcgccacccaacaggacccaaaccaatggcaacag
tctccatcaccgtcgcccttgactacaaacccccasgtgtaccccccacatgytgcctct
ttgcctataccagtcccagtcccagcacaacattcccacggtacagtaatgcacaggttt
ccccawcaggtcatggcaggarttcaacagcctcccattgggtacaccgcccacccagtc
ccctctatgcatactacgaatttgggggcagtaaggtatcctgggaatgttgcrggattg
cagttccaacaaccgccgacaccaacggggacagcaatactacgacctaactcttatcct
tcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (80)   

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