KEGG   Exaiptasia diaphana (Aiptasia): 110253285
Entry
110253285         CDS       T05080                                 
Name
(RefSeq) collagen alpha-3(V) chain
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:epa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110253285
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:epa00536]
    110253285
Glycosaminoglycan binding proteins [BR:epa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110253285
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 110253285
NCBI-ProteinID: XP_020915832
Position
Unknown
AA seq 732 aa
MGLFGKQGPGGPSGPIGFNGTAGPEGFVGEIGKTGKPGKSGGKGDPGSKGRIGPTGDVGE
QGLIGPKGEEGELGIKGYLGSPGAVGVIGLPGEGGEKGIIGVMGPPGFSGYEGIEGNTGP
KGLPGLPGKKGARGGAGDRGESGFKGAKGVTGIVGFRGHPGDPGELGLPGIGVGPQGEKG
MSGIPGTKGPKGYKGFLGFHGKQGFKGVIGDEGHRGNRGAVGTSGIGGKHGPKGEXGTVG
GQGAPGIKGFIGDRGVRGTKGKSGSTGSSGGIGPFGSEGERGDPGPQGKPGSVGGKGEDG
EQGPDGDXGKVGPVGPKGDLGLKGHKGKVGDKGIVGGKGAKGERGREGPKGKVGERGPLG
LFGQKGFRGLLGPIGIPGIKGIPGNMGRKGFQGDSGEAGDRGDKGVRGYNGRMGGIGTKG
TRGDHGEQGEKGAVGRKGPPGVSGRTGKRGGIGAPGPEGLRGSRGMQGSRGEPGVKGVGG
HKGGKGPPGRPGPVRGIRQFTNQLTRHLRQEYMTGSTKNILYMSQSIETPLGTRSNPALT
CKELKHIPGIKDGRYWIDPNMGCPGDAVKVYCRFKTLETCILPHQLELPKQKWHNVTLPG
WKRFSELVKGKKITYRINKVQLNFLRLLSTSVSQRXAIKCKAVVVWFHRTTKSYRYSWKF
HGPRDHEFSQDSKVLPKVLRDNCKYDDGKWRRTVFQFSSEKINQLPIEDFTFYHRSLLEE
ELGAKIGPVCFQ
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgggactctttggaaaacagggtccaggtggtccgtctggtcctattggttttaatgga
actgctgggccagagggctttgttggagaaatcggcaaaactggaaaacctggaaaatct
ggaggaaagggtgatcctggctccaaaggacgtattggaccaactggtgatgttggagaa
cagggactaattgggccaaaaggtgaagagggagagctgggaatcaaaggctacttgggt
agtcctggtgctgttggtgtcattgggttacctggtgaaggtggagaaaagggtatcatc
ggtgtaatggggcctccgggtttctcaggctacgaggggatcgagggaaatacaggtcca
aaaggcttgccgggattgccagggaagaaaggtgcaagggggggagcaggagatcgaggg
gagtccggtttcaagggcgccaaaggagtcactggaattgttggatttcgtggacatcca
ggtgatcctggagaattaggacttcctggaattggcgtgggaccgcaaggagaaaaggga
atgtcgggaattcctgggaccaagggtcctaaaggttacaaaggttttcttggcttccat
ggaaagcagggtttcaagggagtgatcggagatgaaggacatcgtgggaatcgaggggct
gtaggaacatcgggcattggaggtaaacatggaccgaaaggagagcrtggcactgtcgga
ggtcagggagctcctggaataaaaggcttcatcggagatmgaggcgttcgtggaaccaag
ggaaaaagtggttcaactggatcttctggtgggataggtccctttggtagtgagggagaa
cgtggagatcccggtccacagggaaagcctggatcagtaggaggcaagggagaggatgga
gaacaaggaccagatggtgatrgtggtaaagttggtccagtgggtcctaagggtgatctt
ggtttgaaagggcacaaaggcaaagttggtgacaagggtattgtgggaggcaagggtgcc
aaaggggaaagaggaagagaaggacccaagggaaaagtcggtgaaagaggtcccttgggt
ttatttggacaaaaaggtttccggggattacttggcccaattggtatccctggtatcaaa
ggaattcctggyaacatgggtcgcaaaggtttccaaggagattctggcgaagctggtgat
cgaggtgacaagggagtgagaggatataatggcaggatgggtggaattggcacgaagggc
acaaggggtgaccatggagagcagggcgagaaaggtgccgtgggaaggaaaggcccccct
ggtgtaagtggaagaactggtaaacgtggtgggatcggagctccaggacctgagggtcta
cgaggctccaggggaatgcaaggatctaggggcgaaccaggtgtcaagggtgttggcgga
cataagggtggtaaaggtccaccgggtcgtcctggacctgtacgtggtatacgtcaattt
accaaccaactcacaaggcatctacgtcaagagtacatgacaggtagcaccaagaatatc
ctgtacatgtcccagtctatcgagactcctcttggaacacgatccaatcctgcattgaca
tgtaaagaattaaagcatatcccaggcataaaagatgggcgttactggatcgatcctaac
atgggttgtcctggagatgccgtcaaagtgtattgcagatttaaaacccttgaaacatgt
atccttccccaccagcttgagcttcctaaacaaaagtggcataatgtcactctgcctggc
tggaaaagattttcggaacttgtgaaaggaaagaagataacatacagaatcaacaaagtc
caacttaactttctaagattattaagcaccagtgtatcacaaagartagcaataaagtgc
aaagctgtcgtcgtgtggttccatagaacaaccaaaagctatcgatactcatggaaattt
catggccctagagatcatgagttttcacaagatagcaaagtacttcctaaagttcttaga
gacaattgcaagtatgacgatggaaagtggagacgaacagtgtttcaattttctagcgaa
aaaatcaatcaacttccaatcgaagactttacattttaccatcgaagyttacttgaagaa
gaacttggcgctaaaattggacccgtttgtttccagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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