KEGG   Erwinia pyrifoliae DSM 12163: EPYR_01823
Entry
EPYR_01823        CDS       T02121                                 
Symbol
pgpB
Name
(GenBank) phosphatidylglycerophosphatase B
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
epr  Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:epr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:epr03016]
    EPYR_01823 (pgpB)
Enzymes [BR:epr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     EPYR_01823 (pgpB)
Transfer RNA biogenesis [BR:epr03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    EPYR_01823 (pgpB)
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 PilZ ODP
Other DBs
NCBI-ProteinID: CAY74203
Position
complement(1921971..1923914)
AA seq 647 aa
MFQDNPLLAQLKEKLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPFMKKVMHGDRV
SAVIQSEKDREVADPETLIEPFLTRFVGRVQKKDDRLSIIPDHPLLKDAIQCRPERNVKH
DFQTGDWAVAEMRRHPLKGDRTFYAELTEFITTADDHLAPWWVTLSRHNLEREAPDVATP
QEMLDEQLEREDLTALPFVTIDSASTEDMDDALYVEDVGNGVLKLIVAIADPTAYVPVNS
KLDAVAAERAFTNYLPGFNIPMLPRQLSDDICSLRPHERRPVLACRVTLAADGSPADDVQ
FFAAWIESHAKLAYDPVSDWLETEEAGAWQPENEAIANQIRLLNRLCLARSEWRQAHALV
FKDRPDFRFHLGEKGEVLDIIAEHRRIANRIVEESMILANICAANVLRDKLGFGIYNVHH
GFDEVNAGQAAAVLANHGVTADPLAIATLDGFRNLRRELDALPTQFLDSRIRRFQSFAEV
STTPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEESTRPADELTLKMAERRRQ
NRMAERDVGDWLYSRFLQKAVGSEQRFSAEVIDVSRGGMRVRLQENGAVAFIPAPFLHAV
RDELVCSNENGSVQIKGEVVYRVTDLIEVTIAEVRMETRSIVARPVA
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgtttcaggataacccgctgctcgcgcagcttaaagagaagctccactcccagacgccg
cgcgttgaaggtgtggtaaaaggcactgaaaaaggtttcggcttcctggaagtcgatgca
caaaaaagttactttatccccccgccgtttatgaaaaaagtcatgcacggtgaccgcgtc
agtgcggttattcaaagcgagaaggatcgcgaagttgccgatccggaaacgctgattgaa
cctttcctgacgcgctttgtcggccgtgtccagaagaaagacgaccggctgtcgattatt
cccgaccatcccctgctgaaagatgctattcaatgccgccctgagcgtaatgtgaagcat
gacttccagaccggcgactgggccgtggctgaaatgcgccgtcacccgctgaagggcgat
cgcaccttctatgccgaactgaccgaatttatcaccacggcggatgatcatctggctcca
tggtgggtcactctttcgcggcataatctggagcgtgaagcgccggatgtcgctacgccg
caagagatgctggatgaacagctggaacgcgaagatcttacggctctgccatttgtcact
atcgacagtgccagcaccgaagatatggacgatgcgctgtatgtggaagacgtcggtaac
ggtgtgcttaagctgatcgttgctatcgctgacccaacagcctatgttccggtgaacagc
aagctggatgcggtcgcggctgaacgcgcgttcaccaactacctgcccggtttcaacatc
ccaatgctgccacgccagctgtcagatgatatctgttcgctacgcccgcatgagcgccgc
ccggtgctggcgtgccgcgttactctcgccgcagatggttcacccgcagacgacgttcag
ttcttcgccgcctggattgaatctcacgctaagctggcgtatgaccctgtttctgactgg
ttagaaaccgaggaagcaggcgcatggcagcctgaaaacgaggcaatcgccaaccagatc
cgcctgctaaaccgcctctgtctggcgcgcagcgagtggcgccaggcgcatgctctggta
ttcaaagaccgcccagacttccgcttccatctgggtgagaaaggtgaagtactggatatt
attgccgaacaccgccgcattgctaatcgtatcgttgaagaatcgatgatccttgctaat
atctgcgctgccaatgtgctgcgtgacaaactgggctttggtatctataacgtccaccac
ggtttcgacgaagtcaatgccgggcaggccgcagcggtactggctaatcatggcgtaacc
gctgacccgctggcgattgccacgctggatggcttccgcaatttgcgccgcgaactggat
gccctgccgactcagttcctcgacagccgtattcgccgcttccagtcatttgccgaagtc
agcaccacgccaggtccgcactttggtctcggcctggaggcatatgccacctggacctcc
ccgatccgtaagtatggcgatatgattaaccaccgcctgctgaaagctatcattaaaggg
gaagaaagcactcgtcctgccgacgaactgacgttgaagatggcggaacgccgccgtcag
aaccgtatggccgagcgcgatgtgggtgactggctgtactcgcgtttcctgcaaaaagcg
gttggtagcgagcagcgtttcagtgcggaagtgattgatgtctcccgtggcggcatgcgt
gtacgcctgcaggaaaacggtgccgttgcttttatccctgccccatttcttcatgccgtg
cgtgatgagctggtatgcagtaacgagaatggcagcgttcaaatcaaaggcgaagtggtt
taccgcgtcaccgacctgattgaagtgacgattgctgaagtacgtatggaaacccgcagt
atcgtcgcccgcccggtagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system