KEGG   Agathobacter rectalis M104/1: ERE_35080
Entry
ERE_35080         CDS       T02588                                 
Name
(GenBank) Topoisomerase IA
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
era  Agathobacter rectalis M104/1
Brite
KEGG Orthology (KO) [BR:era00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:era03032]
    ERE_35080
Enzymes [BR:era01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ERE_35080
DNA replication proteins [BR:era03032]
 Prokaryotic type
  DNA Topoisomerases
   ERE_35080
SSDB
Motif
Pfam: Topoisom_bac DUF5710 Toprim ATG29_N DUF4364
Other DBs
NCBI-ProteinID: CBK95246
Position
3556626..3559070
AA seq 814 aa
MNNTNNNANSTFSKTHKKIIIAEKPSVAMSYAAALNTQLLRYDGYLEGDEWIVTWAVGHL
VTMSYPEKYDEAYKNWNLDDLPFIPQRYLYETLPNTKDQFNVIKGLYNRPDIDAIYYAGD
SAREGLYIQMLIRMMAGHNPNAKELVVWIDSQTMDEIRKGIREAKPLSAYTNMSASGFIR
AIEDYSTGINISRALTCKYQESVGLKGSIAVGRVMTCVQGMVVEREREIKNFVATKFFKV
KSRIPVGDGYVEAEWKASPEKPHSNMYGNNGFLNKEDAEKFAAGLPRTLSIENLDIKNKN
SYADQLFSLASLQSTCSKLFHISPDQTLQTAQRLYEAKLTTYPRTDARVLSTAVAKEIGR
NVSGLSGLPKYTDVANKILAGDPTSIIGSKRYVDDSKISDHYAIIPTGQNLSALSAMSDI
DQSIYYLIASRFLAIFMPPAVYKKVELVENCGGERFYAGGSTLIDPGYMALTGIPNGSSK
LPVAVESLQPGQQFPCQIALFAGETTPPNRYTSGSMITAMENAGNSLEEETLKGVLKDCG
IGTSSTRAAIIKKLDDIGYISINKKTQIMTPTDTGIAIYEIIKNSIPELLNPKITAQWEE
GLNGIVKGQVNPNEYQNKIHEYVRNKVNDIKNMTISDDFSAYIKTFNIETKKKPGQKKVE
AEAYLNVPYEDKDKVKELGAFFDMKNKMWFVPKGRSTEPFAKWLTNAKTVKKIRLDVPFE
DKDAVKSLGARWDKDRKTWYILSTMDKNTFSKWIPKDGNTKMPASAANAKKIAIKVPFDD
KDEVKSLGARWDKDHKTWYILSTMDKTKFAKWLK
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgaataacacaaataataacgcaaactcaacattttctaaaactcacaaaaaaataatt
attgcggagaaaccatcagttgcaatgagctatgcagcagctttaaatacacaattgtta
agatatgacgggtatcttgaaggtgatgaatggattgttacatgggcagtaggacacctt
gtcaccatgtcttatccggaaaaatatgatgaggcatataaaaactggaatcttgatgac
ctgccattcattccgcagagatatttatatgaaacacttccaaatacaaaagaccagttc
aatgtgataaagggactctataacagaccagatattgatgcaatctattatgccggtgac
tctgcaagagaagggctttatatacagatgcttatcagaatgatggccggacacaatcca
aatgcaaaagaacttgttgtatggattgattcgcagacaatggacgaaatcagaaaaggc
ataagagaagcaaaaccgctgtctgcatatacaaatatgtctgcaagcggatttatccgt
gcaattgaggattattcaacaggtatcaacatttcaagagcgcttacatgtaaatatcag
gaaagcgttggacttaagggctcaattgcggtaggcagagtcatgacctgtgtacaggga
atggttgtggaaagagaaagagagattaaaaactttgtcgcaacaaaattcttcaaagta
aaatcacgtatcccagtaggagacggctatgttgaggcagaatggaaagcaagtcctgaa
aaaccgcacagcaacatgtatggcaataatggatttttaaacaaagaggatgctgagaaa
tttgccgccggactgccaagaacactttcaatagaaaatcttgacattaaaaataagaac
tcgtatgcagatcagctgttttctcttgcaagtttacagagtacgtgttcaaagctgttt
catatttctccagaccagacattacagacggcacagagactttatgaagcaaaacttact
acatatccaagaaccgatgcaagagtattatcaacagcagttgcaaaggaaatcggcaga
aacgtttcaggattgtcgggacttccgaagtatacagatgttgcaaacaaaattcttgca
ggcgatccaacatcaattattggcagtaaacgatatgttgatgacagtaagatttcagac
cactatgcaattattccgaccggacagaacttgtcagcactttctgcaatgtcagacatt
gaccagtctatttactatctgattgcatcaagatttttagcaatatttatgccgccagca
gtatataaaaaggttgagcttgttgagaactgtggcggagaacgtttttatgcaggtggc
tcaacactcattgatccgggttatatggcactcacaggtattccaaatggtagcagcaaa
cttccagtagcagttgagtcattacagccggggcagcagttcccatgccagatagcttta
tttgcaggagaaacaacgcctccaaatcgttatacatcaggttcaatgattacagcaatg
gagaacgcaggcaattctcttgaagaagagactttaaagggtgtgctcaaagactgtgga
attggaacatcatcaacaagagctgcaatcataaagaaactggatgacataggctatata
agcattaacaagaaaactcagataatgacaccaactgatacaggcattgccatttatgaa
atcattaaaaattccattccagagctgttaaacccaaagattacagcacagtgggaagaa
ggcttgaatggaattgtaaaaggacaggtcaatccaaatgagtatcagaataaaatccat
gagtatgtaagaaacaaagttaatgacattaagaacatgactatttcagatgacttttct
gcatacataaagacttttaacattgaaaccaagaaaaagcctggccagaaaaaagtggaa
gcagaagcatacctgaatgttccatatgaggataaggataaggtaaaagagctcggtgct
ttctttgatatgaaaaacaaaatgtggttcgtgcctaaaggaagatctactgaaccgttt
gcaaaatggcttacaaatgcaaagactgtgaagaaaatcagactggatgtgccatttgaa
gataaggacgccgtaaagagtcttggcgccagatgggataaggacagaaaaacttggtac
atcttaagcactatggacaaaaacactttcagcaaatggatccccaaagacggtaacaca
aaaatgccagcaagcgcagcaaatgcaaagaaaatagcaattaaagtgccatttgatgac
aaagatgaggttaaatcacttggagccagatgggataaggaccacaaaacttggtatatc
ttaagcaccatggacaaaacgaaatttgcaaaatggcttaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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