KEGG   Eremothecium cymbalariae: Ecym_2382
Entry
Ecym_2382         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
erc  Eremothecium cymbalariae
Pathway
erc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Ecym_2382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:erc03019]
    Ecym_2382
Enzymes [BR:erc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     Ecym_2382
Messenger RNA biogenesis [BR:erc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     Ecym_2382
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N nSTAND3 AAA_16 MMR_HSR1 AAA_24 AAA_33 RNA_helicase AAA_7 PduV-EutP Septin ATP_bind_1 ABC_tran AAA_29 AAA_28 SRPRB AAA_18 Roc AAA_23 CbiA
Other DBs
NCBI-GeneID: 11473074
NCBI-ProteinID: XP_003644932
UniProt: G8JNP7
Position
2:739410..740747
AA seq 445 aa
MTAMSNIQESLQPIDFDSPVVAAKSVLIPPGKEWRVKVPAESKLTVKILYGIAELFGTEL
TNDIEYTFKCANIAILAIDHVKFEWKSSDPLEPSLSSDTSMPYIYNMHFALEKMRISSFD
GPRILIVGKSSSGKTTLAKTLCAYALKSKAYTPMYVNLNPQEGVFSPPGCLTATPISDIL
EVESTTWGQSMTSGATRLHNKQPMVKNFGLEVIAENRELYIEIMDQLARSVDGRLKNDPH
VRRSGVIVDTPPISHLDESFVELEAAIKNFNIGTLVVCASDDSLAIQLNQKFQTQVRSIV
RIPTSPGTVEIDEVARRAFQRSQVSEYFYGNLVTVLSPYTIGVDLMDVVIWKPKSKLTTP
GISKTTNMIELDRVEVTASNLQHALVAITYAPRKSTPQEVLKSDILGLALITEVNDSKRK
MRILLPVPGRLPDKAMILTAYRYLE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgactgctatgtcgaacattcaggagtcgttgcagccgatagactttgactccccagtc
gttgcagccaagtctgtcttgattcctcctggtaaggaatggagggtcaaagtgccagct
gaatccaagctgacagttaaaatcctatatggtatcgcagagctatttggtacggaacta
actaatgatatcgaatacacatttaaatgtgctaatattgctatactcgctattgatcat
gtaaaatttgaatggaagagttcagacccgttggagccatctttgtcgtctgacacatcg
atgccctacatctacaacatgcattttgctttggaaaaaatgaggatatcaagcttcgat
ggtcctagaatacttatagttggaaaatcttcctcagggaagactactctagccaaaact
ctctgtgcatatgcattaaagagcaaagcttataccccgatgtacgtcaatctaaatcca
caggaaggtgtcttttccccgccgggttgcttaactgccacaccaatctcagatatttta
gaggtggaatccactacctggggtcagagtatgaccagtggtgctacaaggcttcataat
aagcaacccatggtgaagaattttgggttggaagtgattgctgaaaatcgggaattgtat
attgagattatggaccagttggcacggagtgttgatgggagactgaaaaatgatcctcat
gtgagacggtctggtgtcattgttgatacaccacctatatctcatttggacgaaagcttt
gttgaattggaggcagctatcaaaaacttcaacatcggtacgttagttgtatgtgctagt
gacgattccttggccatccaactaaatcaaaaatttcaaactcaggtacgctccattgta
agaattccgaccagcccaggaactgtcgaaattgatgaggtagctagaagggcgtttcaa
agaagtcaagttagtgagtatttttacggaaatttggttacggttctaagtccatatacc
atcggagtcgatctcatggatgtggtaatatggaagccaaaaagtaagctgactacacct
ggcatttccaaaaccacaaacatgatagaattagatcgtgttgaggttaccgccagtaat
ttgcaacatgctcttgtggccataacatacgcaccaagaaagagtaccccacaagaagtc
ctgaaaagtgatattcttggattagcgttgattacagaagttaacgatagcaaaaggaaa
atgagaatattactaccagttcctggccggttacctgataaggcaatgattctgactgca
tatagatatctagaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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