KEGG   Encephalitozoon romaleae: EROM_051380
Entry
EROM_051380       CDS       T03458                                 
Name
(RefSeq) U6 snRNA-associated small Sm-like protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ero  Encephalitozoon romaleae
Pathway
ero03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ero00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EROM_051380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ero03019]
    EROM_051380
Messenger RNA biogenesis [BR:ero03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EROM_051380
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     EROM_051380
SSDB
Motif
Pfam: LSM Hfq DUF150_C
Other DBs
NCBI-GeneID: 20521369
NCBI-ProteinID: XP_009264565
UniProt: I6ZIM1
Position
V:complement(167056..167379)
AA seq 107 aa
MLDEDFGNTRDYEKYLEQEIVVVLRDGRYLYGIMKSFDQFNSITLDRVIERIFHDEKYAE
RKHELFIIRGENITMIGLGPSDIGRGLVQVDFLVLRNEILSSQLQPS
NT seq 324 nt   +upstreamnt  +downstreamnt
atgctagatgaggatttcggcaataccagagattatgagaaatatctggagcaagagatt
gttgttgtgctacgggatggaagatatctatatggcataatgaagtcttttgatcaattt
aatagtataacattggacagggtcatagaaaggatattccatgacgaaaaatatgcagag
aggaaacatgagctatttataataagaggagaaaatatcacgatgataggcttaggccct
tcagatataggaagagggttggtacaggtagacttcttagttctcagaaacgaaattcta
agctcgcagcttcaacctagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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