KEGG   Encephalitozoon romaleae: EROM_091830
Entry
EROM_091830       CDS       T03458                                 
Name
(RefSeq) U6 snRNA-associated ribonucleoprotein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
ero  Encephalitozoon romaleae
Pathway
ero03018  RNA degradation
ero03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ero00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EROM_091830
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EROM_091830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ero03019]
    EROM_091830
   03041 Spliceosome [BR:ero03041]
    EROM_091830
Messenger RNA biogenesis [BR:ero03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EROM_091830
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     EROM_091830
Spliceosome [BR:ero03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    EROM_091830
 Complex C
  U2 snRNP components
    EROM_091830
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 20564407
NCBI-ProteinID: XP_009265295
UniProt: I6ZKH8
Position
IX
AA seq 94 aa
MLFYEFFRSNIGKRIFVMLKAGVYVSGVLNSIDPYLNLNLLKVKILSNHPGLDSISLCSI
RGSSIKYILADKDSNLLQGVNAGSRLRMVLDKCY
NT seq 285 nt   +upstreamnt  +downstreamnt
atgctgttttatgagttttttagatccaacatcggaaaacgaatttttgtgatgctaaag
gcgggagtgtatgtatctggagtgctaaatagcatagatccatacctcaacctaaatctt
ttgaaggtgaagatacttagcaatcaccctggtctggatagtatttctctatgttctata
cgaggttcgtcgataaaatatattcttgctgataaggattccaacctattgcaaggagtg
aatgctgggagtaggctccgaatggtgctcgataaatgctattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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