KEGG T02316: O3M

Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_18090

Entry

O3M_18090         CDS       T02316

Name

(GenBank) deoxyribodipyrimidine photolyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

esm Escherichia coli O104:H4 2009EL-2050 (EAEC)

Brite

KEGG Orthology (KO) [BR:esm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:esm03400]
    O3M_18090
Enzymes [BR:esm01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     O3M_18090
DNA repair and recombination proteins [BR:esm03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    O3M_18090
Prokaryotic type
    O3M_18090

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase

Other DBs

NCBI-ProteinID:

AFS58286

Position

complement(3679627..3681045)

AA seq 472 aa
MITHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLN
GLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERA
LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS
IEPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSA
SLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSELIWREFYRHLMTYYPSLCKHCPFIA
WTDRVQWQSNPAHLQAWQKGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW
REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPITQGEKFDREGEFIRRWL
PELRDVPGKAVHEPWKWAQKAGVKLDYPQPIVDHKEARLRTLAAYEEARKGA

NT seq 1419 nt +upstreamnt +downstreamnt
atgattacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactg
gctgccgcctgccgcaattcgtctgcacgcgtgctggcgttatatatcgctacaccacgc
cagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaat
gggctacaaatagcgcttgcggaaaaaggtattcctttattgttccgtgaagtggatgac
tttgtcgccagtgtcgaaatagttaaacaggtgtgcgcggaaaacagcgttacccacctg
ttttataactatcagtatgaagtgaatgagcgggcgcgggatgtggaagttgaaagagcg
ctgcgtaacgtggtgtgtgaaggatttgatgacagcgtgatcctgccgcctggcgcggtg
atgaccggtaatcacgagatgtacaaagtctttacgccttttaagaatgcctggctgaaa
cggctgcgggaagggatgccggagtgtgtcgctgcgccaaaagttcgtagtagcggatcg
atagagcccgcgccatccattacgctgaattatcctcgtcagtctttcgatactgcgcat
ttcccggtggaagaaaaagcggcgattgcgcaattacgccagttttgccagaacggtgcc
ggagaatatgagcaacaacgagattttccggcagtggaaggcaccagtcgtttgtccgcc
agcctggcaacgggcgggttatcgcctcgccagtgtttgcatcgcttgttggcggaacag
ccgcaggcgctggacggtggggccggtagtgtctggcttagtgagctgatctggcgcgag
ttctaccgtcatctgatgacgtattacccctcgttgtgtaaacattgtccgtttattgcc
tggacggatcgtgtgcagtggcaaagcaatcccgcacatttacaggcctggcagaaaggc
aaaacgggatacccgattgttgatgccgctatgcgtcagcttaacagcactggctggatg
cataaccggctacggatgattacagccagttttctggtgaaagatttgttgatcgactgg
cgcgaaggcgagcgatatttcatgtcgcagctgattgatggtgatttggcagctaataac
ggtggctggcagtgggcggcttctacgggtactgatgctgcgccgtattttcgtattttc
aatccgataactcagggcgagaaatttgatcgcgaaggtgagtttatccgccgatggtta
ccggagctgcgcgatgtaccagggaaagcggtgcatgagccgtggaagtgggcgcagaaa
gcaggtgtgaagctggattatccgcaaccgatagttgatcacaaagaggcaaggctgcga
acgctggcagcgtacgaagaagcgaggaaaggagcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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