KEGG T02316: O3M

Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_24900

Entry

O3M_24900         CDS       T02316

Name

(GenBank) ATP-dependent DNA helicase Rep

K03656

ATP-dependent DNA helicase Rep [EC:5.6.2.4]

Organism

esm Escherichia coli O104:H4 2009EL-2050 (EAEC)

Brite

KEGG Orthology (KO) [BR:esm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:esm03400]
    O3M_24900
Enzymes [BR:esm01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     O3M_24900
DNA repair and recombination proteins [BR:esm03400]
Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    O3M_24900

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 Viral_helicase1

Other DBs

NCBI-ProteinID:

AFS59624

Position

complement(5169067..5171088)

AA seq 673 aa
MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA
REMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKEL
TEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGERDRIFAHCYGLYDAHLKACNV
LDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVV
GDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEK
RLFSELGYGTELKVLSANNEEHEAERVTGELIVHHFVNKTQYKDYAILYRGNHQSRVFEK
FLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKK
LGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRLAEREPIAAVRDLIH
GMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMM
ERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGI
TRAQKELTFTLCKERRQYGELVLPEPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHL
ANLKAMMAAKRGK

NT seq 2022 nt +upstreamnt +downstreamnt
atgcgtctaaaccccggccaacaacaagctgtcgaattcgttaccggcccctgcctggtg
ctggcgggcgcgggttccggtaaaactcgtgtgatcaccaataaaatcgcccatctgatc
cgcggttgcggttatcaggcgcgacatatcgcggcggtgacctttaccaataaggcggcg
cgcgagatgaaagagcgtgtcggacagacgctgggtcgcaaagaggcgcgtgggctgatg
atctcaaccttccacacgctggggctagatatcatcaagcgtgagtatgcggcgctgggg
atgaaggcgaacttttcgctgtttgacgataccgatcagctggcgttgctcaaagagttg
accgaagggctgattgaagatgacaaagttctcctgcaacagttgatttcgaccatctct
aactggaagaacgatctcaaaacaccgtcccaggcggcagccagtgcgattggcgagcgg
gaccgtatttttgcccattgttatgggctgtatgatgcacacctgaaagcgtgcaatgtt
ctcgacttcgatgatcttattttattgccgacgttgctgctgcaacgcaatgaagaagtc
cgcgagcgctggcagaacaaaattcgctatctgctggtggatgagtatcaggacaccaac
accagccagtatgaactggtgaaactgctggtgggcagccgcgcgcgctttaccgtggtg
ggcgatgacgaccagtcgatctactcctggcgcggcgcacgtccacaaaacctggtgctg
ctgagtcaggattttccggcgctgaaggtgattaagcttgagcagaactaccgctcttcc
ggacgtattttgaaagcggcgaacatcctgatcgccaataacccgcacgtctttgagaag
cgtctgttctccgaactgggttacggcacagagcttaaagttttaagcgcgaataacgaa
gaacatgaagccgagcgcgtcactggtgaactgattgtgcatcacttcgtcaataaaacg
cagtacaaagattacgccattctttatcgcggtaaccatcagtcgcgggtgtttgaaaaa
ttcctgatgcaaaaccgcatcccgtacaaaatttctggtggtacgtcgtttttctctcgt
cctgaaatcaaggacttgctggcttatctgcgcgtgctgactaacccggacgatgacagc
gcatttctgcgtatcgttaacacgccgaagcgagagattggcccggcgacgctgaaaaag
ctgggtgagtgggcgatgacgcgcaataaaagcatgtttaccgccagctttgatatgggc
ctgagtcagacgcttagcggacgtggttatgaagcattgacccgcttcactcactggttg
gcagaaatccagcgcctggcggagcgggagccgattgctgcggtgcgtgatctgatccat
ggcatggattatgaatcctggctgtacgaaacatcgcccagcccgaaagccgccgaaatg
cgcatgaagaacgtcaaccaactgtttagctggatgacggagatgctggaaggcagtgaa
ctggatgagccgatgacgctcacccaggtggtgacgcgctttactttgcgcgacatgatg
gagcgtggtgagagtgaagaagagctggatcaggtgcaactgatgactctgcacgcgtca
aaagggctggagtttccttatgtctacatggtcggtatggaagaagggtttttgccgcac
cagagcagcatcgatgaagataatatcgatgaggagcggcggctggcctatgtcggcatt
acccgcgcccagaaggaattgacctttacgctgtgtaaagaacgccgtcagtacggcgag
ctggtgctcccggagccgagccgctttttgctggagctgccgcaggatgatctgatttgg
gaacaggagcgcaaagtggtcagcgccgaagaacggatgcagaaagggcaaagccatctg
gcgaatctgaaagcgatgatggcggcaaaacgagggaaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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