KEGG   Williamsoniiplasma somnilux: ESOMN_v1c05480
Entry
ESOMN_v1c05480    CDS       T05210                                 
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 component
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
esx  Williamsoniiplasma somnilux
Pathway
esx00010  Glycolysis / Gluconeogenesis
esx00020  Citrate cycle (TCA cycle)
esx00260  Glycine, serine and threonine metabolism
esx00280  Valine, leucine and isoleucine degradation
esx00620  Pyruvate metabolism
esx00630  Glyoxylate and dicarboxylate metabolism
esx00640  Propanoate metabolism
esx00785  Lipoic acid metabolism
esx01100  Metabolic pathways
esx01110  Biosynthesis of secondary metabolites
esx01120  Microbial metabolism in diverse environments
esx01200  Carbon metabolism
esx01210  2-Oxocarboxylic acid metabolism
esx01240  Biosynthesis of cofactors
Module
esx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:esx00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    ESOMN_v1c05480 (pdhD)
   00020 Citrate cycle (TCA cycle)
    ESOMN_v1c05480 (pdhD)
   00620 Pyruvate metabolism
    ESOMN_v1c05480 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    ESOMN_v1c05480 (pdhD)
   00640 Propanoate metabolism
    ESOMN_v1c05480 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ESOMN_v1c05480 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    ESOMN_v1c05480 (pdhD)
   00310 Lysine degradation
    ESOMN_v1c05480 (pdhD)
   00380 Tryptophan metabolism
    ESOMN_v1c05480 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    ESOMN_v1c05480 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:esx04147]
    ESOMN_v1c05480 (pdhD)
Enzymes [BR:esx01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     ESOMN_v1c05480 (pdhD)
Exosome [BR:esx04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   ESOMN_v1c05480 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 Biotin_lipoyl_2 FAD_binding_2 GIDA AlaDh_PNT_C FAD_oxidored GCV_H 3HCDH_N NAD_binding_8 FAD_binding_3 RnfC_N Thi4 NQRA PTS_EIIA_1 DAO HI0933_like
Other DBs
NCBI-ProteinID: ATZ18930
UniProt: A0A2K8NYM8
Position
complement(642444..644267)
AA seq 607 aa
MFEVKFADIGEGLTEGKVTEILVKIGDQVKMGDSLFHVETDKVNSEIPTPVAGTIAKILV
KPDEEIKVGQVVFVIDDGSTSSPVKEENKSEAKSEPVEENASVVGSTPVSNDVLPSRAPE
AQKPSQPTIQKSSVKYDTKEDFDVIVVGAGIGGYVSAIKVAQLGLKAMIVEKQYYGGVCL
NVGCIPTKALLKAAKAFDIALNKNDVFGISYPGNVKPSLDWKKVQSRKDDIVGKLTGGVR
YLLDKNKVKRIEGKAQALDPNTVEVDGIKYGCKNLIIATGSVPNSLPLPGFAEAAKSGYL
INSTGALSLPTIPKKLVIIGGGVIGVEFACLYANVGVEVTILQGLPTILEMLDKDVITEM
TKQLKERYKINVITNAKIKEIKDKSVIYELDGKEQKITTDYCLESVGRKTVIDGFENMGL
DITDRKAINVDDYCETNIEGVYAIGDVIGKAMLAHVASHAGIVAANRIAMKNGSSKAHDI
KMDFAKIPSCIYTSPEVAMIGKTEQQLEKEGVEYKAFKFPFSAIGKALVDDHPYGFVKLI
VEPKYKTVLGAHIIGSTATEMISEITTLIECEGTITEVARAIHPHPTMSEAIGEVAEALE
TGLPINL
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtttgaagtaaaatttgcagatattggagaaggtttaactgaaggtaaagttactgaa
attttagttaaaattggagaccaagtaaaaatgggggatagtttatttcacgttgagact
gataaagttaattctgaaattccaactcccgttgcagggacaattgctaaaatcttagtt
aaacccgatgaagagattaaggttggacaagtggtttttgtaatcgatgatggttcaaca
tcatcacctgtaaaagaagaaaataaatcagaagcaaaatctgaaccagttgaagaaaat
gctagtgttgttggttcaacaccagtatcaaatgacgttcttccaagtcgtgcaccagaa
gctcaaaaaccttctcaaccaacaattcaaaaatcaagtgttaaatatgacacaaaagaa
gattttgatgtaattgttgttggagcgggaattggaggatacgtttctgcaattaaagtt
gcgcaactaggtttaaaagcaatgattgttgaaaaacaatattatggaggagtttgttta
aatgttggatgtattccaaccaaagcattattaaaagcagcaaaagcctttgatattgct
ttaaataaaaatgatgtttttggaatttcatacccagggaatgttaaaccttctttagat
tgaaaaaaagttcaatctcgtaaagatgatattgttggtaaattaactggaggagttcgt
tatttactagataaaaataaagttaaacgcattgagggaaaagctcaagctttagatcca
aatactgttgaagttgatggaattaaatatggatgtaaaaatttaatcatcgcaactgga
tcagttccaaattcattacctttaccaggatttgctgaagcagctaaatcaggttattta
atcaattcaactggtgctttatctttacctactattcctaaaaaattagtaattattggt
ggaggagttattggtgttgaatttgcttgtttatatgcaaatgttggcgtagaagtaact
atattacaaggattacctacaattttagaaatgcttgataaagatgtaattactgaaatg
actaagcaattaaaagaacgttacaaaatcaatgttataactaatgcaaaaattaaagaa
attaaagataaatcagttatatatgaacttgatggaaaagaacaaaaaatcacaactgat
tattgtttagaatctgttggaagaaaaactgttattgatggttttgaaaatatgggatta
gacataactgatagaaaagcaattaatgtagatgattattgtgaaactaacattgaagga
gtttatgcaatcggtgacgttattggtaaagcaatgttagcgcatgtggcatcacatgca
ggaattgttgctgcaaatagaattgctatgaaaaatggaagttctaaagcacatgatatt
aaaatggattttgcaaaaattccaagttgtatttatacatctcctgaagttgcaatgatt
ggaaaaactgagcaacaacttgaaaaagaaggcgttgaatacaaagcatttaaatttcca
ttctcagcaattggaaaagctttagttgatgatcatccttacgggtttgttaaactaatt
gttgaacctaaatataaaactgtactaggagctcacataattggttcaacagcaacagaa
atgatttctgaaattacaacattaattgaatgtgaaggaacaataactgaagttgcaaga
gcaattcaccctcacccaactatgagtgaagcaattggtgaagttgcagaagctttagaa
acaggtttaccaatcaatttataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (21)   
   KEGG PATHWAY (14)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (87)   

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