KEGG T01121: ETAE

Edwardsiella tarda EIB202: ETAE_0404

Entry

ETAE_0404         CDS       T01121

Symbol

nusA

Name

(GenBank) transcription elongation factor

K02600

transcription termination/antitermination protein NusA

Organism

etr Edwardsiella tarda EIB202

Brite

KEGG Orthology (KO) [BR:etr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:etr03021]
    ETAE_0404 (nusA)
   03009 Ribosome biogenesis [BR:etr03009]
    ETAE_0404 (nusA)
Transcription machinery [BR:etr03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     ETAE_0404 (nusA)
Ribosome biogenesis [BR:etr03009]
Prokaryotic type
  rRNA transcription factors
   ETAE_0404 (nusA)

SSDB

Motif

Pfam:

NusA_N KH_5 HHH_5 S1 DUF4332 DNA_pol_lambd_f KH_2 KhpA-B_KH Replicase

Other DBs

NCBI-ProteinID:

ACY83251

Position

446772..448259

AA seq 495 aa
MNKEILAVVEAVSNEKALPREKIFEALETALATATKKKYEQEIDVRVAIDRKSGDFDTFR
RWLIVDEVTQPTREITLDAARFEDPALDLGDYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVDAFREHEGEIVTGVVKKVNRDSISLDLGNNAEAVIGREDMLPRENFRPGDRIR
GVLYAVRPEARGAQLFVTRSRPEMLIELFRIEVPEIGEEVIEIKGAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE
DKHTMDIAVEASNLAQAIGRNGQNVRLASQLSGWELNVMTAEDLQAKHQAEAHAAIDTFT
KHLDIDEEFATLLVEEGFSTLEELAYVPERELLSIDGLDEETVEALRTRAKNALTTLALA
QEESLGDNKPADDLLNLPGMERSVAFKLAARGVCTLEDLAEQGVDDLTDIEGLNNEQAGE
LIMAARNICWFGDSE

NT seq 1488 nt +upstreamnt +downstreamnt
atgaataaagagattctggctgttgtggaggccgtttccaacgaaaaggcgctgccgcgc
gagaagatttttgaggcgctggaaaccgcgctggccacggccaccaagaaaaaatatgag
caagaaatcgatgtgcgtgtcgccatcgatcgtaaatccggtgacttcgacaccttccgc
cgctggctgatcgttgacgaagtgacccagccgacccgtgaaatcacgctggatgcggcg
cgttttgaagatccggcgctggatctgggcgactatgtagaagatcagattgaatcagtg
accttcgaccgtatcaccacccagaccgccaagcaggttatcgtacagaaagtacgcgag
gccgagcgtgcgatggtggttgatgcgtttcgtgagcacgaaggcgaaatcgtcaccggc
gtagtcaagaaagttaaccgtgacagcatctccctggatctgggcaacaacgcggaagcg
gtgattggccgtgaagacatgctgccgcgcgaaaacttccgtccgggcgaccgcattcgc
ggcgtactgtatgccgtgcgtccggaggcccgtggtgcgcagctgttcgtcacccgctcc
cgtccggagatgctgattgaactgttccgcatcgaagtgccggagatcggcgaagaagtg
atcgaaatcaagggcgccgcgcgcgatccgggctcccgagccaagattgccgtgaagacc
aatgataagcgtatcgatccggtcggcgcctgcgttggtatgcgcggtgcgcgcgtgcag
gccgtttccagcgagctgggcggcgagcgtatcgatatcgtgctgtgggatgataatccg
gcgcagttcgtcattaacgccatggcgcctgccgacgttgcatccatcgtggtggacgaa
gacaagcacaccatggatatcgctgtagaggcctccaacctggctcaggccatcggccgt
aacggtcagaacgttcgtctggcgtctcagctgagcggctgggagctgaacgtgatgacg
gcggaggatctgcaggctaagcaccaggcggaagcccatgcggccattgataccttcacc
aagcatctggatatcgatgaagagttcgctacgctgctggtcgaggaaggcttctccacg
ctggaagagctggcctacgtaccggagcgcgagctgctgtccatcgatggtctggatgaa
gagaccgtcgaggcgctgcgcacccgtgccaagaacgcgctgacgacgctggcgctggcg
caggaagagagcctgggcgacaacaaaccggcggacgatctgctcaatctgccggggatg
gaacgcagcgtggcctttaagctggccgcacgcggtgtatgcacgctggaagatcttgcc
gagcagggtgtcgacgacctgaccgatattgaaggcctgaacaatgaacaggcgggcgag
ctgattatggctgcgcgtaatatctgttggtttggcgatagtgaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system