KEGG T01121: ETAE

Edwardsiella tarda EIB202: ETAE_0727

Entry

ETAE_0727         CDS       T01121

Symbol

truC

Name

(GenBank) tRNA pseudouridine synthase C

K06175

tRNA pseudouridine65 synthase [EC:5.4.99.26]

Organism

etr Edwardsiella tarda EIB202

Brite

KEGG Orthology (KO) [BR:etr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:etr03016]
    ETAE_0727 (truC)
Enzymes [BR:etr01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.26  tRNA pseudouridine65 synthase
     ETAE_0727 (truC)
Transfer RNA biogenesis [BR:etr03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    ETAE_0727 (truC)

SSDB

Motif

Pfam:

PseudoU_synth_2 DUF3293

Other DBs

NCBI-ProteinID:

ACY83572

Position

805384..806214

AA seq 276 aa
MLRFFFLSGIGMEIIYQDEHLVAINKPAGWLVHRSWLDRKEKVVVMQTVRDMLGRHVYTV
HRLDRPTSGVLLLGLSSEVARALAQQFEQHQIHKVYHAVVRGYLQGEALLDYPLTPELDK
IADRFRSPDRAPQPAQTHYRGLATAEVPLAIGRYPTSRFSLVELMPQTGRKHQLRRHMAH
LRHPIIGDTAHGDLRQNRGVAAHFGTPGLMLHASELRLTHPVSGEALCLRAGLDLRWQEL
MDGLGWQAYLPELDRVEFMPDCPQDRADETETGQEA

NT seq 831 nt +upstreamnt +downstreamnt
gtgctgcgttttttctttttgtcgggtatcgggatggaaattatttatcaggatgagcat
ctggtggcaatcaataagcctgccgggtggttggttcaccgcagctggctggatcgcaaa
gagaaggtggtagtgatgcagacggtgcgcgatatgctcgggcgccatgtctataccgtt
catcgcctggatcggccgacctccggggtgctgctgctggggctgtcgagcgaggtggcg
cgcgcgctggcccagcagttcgaacagcatcagatccataaagtctaccatgcggtggtc
cgcggctatctgcagggggaggcgctgctcgactacccgttgacgccggagctggataag
atcgccgatcgtttccgctctcccgatcgcgctccgcagccggcgcagacccactaccgt
gggctggcgacggcggaggtgccgctggccattggccgttacccgacgtcacgctttagc
ctggtcgagctgatgccgcagaccgggcgcaagcaccagctgcgtcgccacatggcgcac
ctgcgccacccgatcatcggcgataccgcacacggcgacctgcgccagaatcgcggcgtc
gctgcccactttggcacgcccggtttaatgctgcacgccagcgaactgcgcctgacgcac
ccggtgagcggtgaggcgctgtgcctgcgggccggcctggatctgcgctggcaggagctg
atggacggactgggttggcaagcctatctccctgaacttgatcgggttgagtttatgccc
gattgccctcaggatagagcggatgagacagagaccggccaagaggcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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