KEGG   Escherichia coli UMNK88 (ETEC, porcine): UMNK88_238
Entry
UMNK88_238        CDS       T02001                                 
Name
(GenBank) conserved hypothetical protein
  KO
K11896  type VI secretion system protein ImpG
Organism
eun  Escherichia coli UMNK88 (ETEC, porcine)
Brite
KEGG Orthology (KO) [BR:eun00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:eun02044]
    UMNK88_238
Secretion system [BR:eun02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   UMNK88_238
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: AEE54892
Position
complement(257843..259693)
AA seq 616 aa
MEFEERYFREELDYLRQLSKLLATEKPHLARFLAEKDADPDIERLLEGVAFLTGNLRQKI
EDEFPELTHGLIKMLWPNYLRPVPAMTLIEYTPDMDKSSVPVLIPRNEQFTTNAGEIRVD
EVLPSDAKKEEPPPCTFTLCRDIWLLPVRLEQIENRSTTRNGVINITFSVAPGTDFRTLD
LNKLRFWLGNDDNYTRDQLYLWFCEYLQGADLTVGEQHLRLPEFMLKAVGFEPQDAMLPW
PKNVHSGYRILQEYFCYPDAFLFFDLCGCPALPDGLQAEFFTLQLRFSRPLPVDIRLRRD
SLRLYCAPAINLFIHHAEAITLDNRRADYPLVPSRHYPQHYDVFSVNSVVSQVQDMFRKK
DLGRPVSTQAARQWPAFESFSHQMEYSRKREVVYWHHRTKTSLFHRGFDHTLAFIHADGS
YPSDESLLSNEVVSVSLTCTNRELPSQIRSGDITGTTGKNAAVASFRNITRPTQPLWPVI
DGSLHWSLLSAMNLNYLSLLDTDALKQVIANFDRHAIHHPQTARLSQQKLDAIERLETRP
VDRLFTGIPVRGLASTLYLHPEPFVCEGEMYLLGTVLSHFLSLYASVNSFHMLTVVNTES
QETWKWTERIGQHPLI
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggaatttgaagaacgctatttccgggaagaactcgattacctgcgccagcttagcaag
ctgctggcaacggaaaaaccccatctggcccgcttcctggccgaaaaagatgcggatccg
gatattgaacgcctgctggaaggggtggcttttcttaccggcaatctccgccagaaaatt
gaggatgaattcccagaactgacgcacgggcttattaagatgctatggcctaattacctg
cgtccggttccggcaatgacccttattgaatatacgccggatatggataagtcttctgta
ccggtgttaatcccccgtaatgagcagtttacaaccaacgccggggaaatcagagttgat
gaagtgctgccctctgatgctaaaaaggaggagccgcctccctgtaccttcaccctctgc
cgggatatctggctgctgcccgttcgcctggagcagattgaaaaccgcagtacgacccgt
aatggtgttatcaacatcaccttttcggtcgcaccgggaacggacttccgcacgctggat
ctgaacaaacttcgcttctggctcggcaatgacgacaactatacccgtgaccagctttat
ttatggttctgcgaatacttgcagggtgccgacctgactgtgggtgaacagcatcttcgc
ctgcctgagtttatgctaaaagctgtcggttttgagccgcaggatgccatgctgccctgg
ccgaaaaacgtccacagcggctaccggatccttcaggagtatttctgttaccccgatgcg
tttctcttttttgatctttgtggttgtccggctttgcctgacggattgcaggcggaattc
tttaccctgcaactgcgtttttcgcgccctttgcccgtggacatccggctgcgccgcgat
tccctgcgcctgtattgcgcacctgccattaatttatttatccaccatgcagaagccatc
acgctggacaaccggcgggcagactatccgctggttcccagccgccattacccacaacat
tacgatgtattttccgttaacagtgtggtgagccaggtccaggatatgttcaggaaaaaa
gatctggggcgtcctgtttcgacgcaggccgcgcgccagtggccagcctttgaaagtttc
agccatcagatggaatacagccggaagcgggaagtggtgtactggcatcaccggaccaaa
acatccctgttccatcgcggctttgatcatacccttgcctttatacatgctgatggcagt
tatccgtcagacgaatctctgctcagtaatgaagtggtttcggtatcgctgacctgtacc
aaccgtgagcttccgtcacaaattcgttccggcgatatcaccggcacaaccggtaaaaat
gcggctgttgcttcatttcgcaacattacccgcccgacgcaaccactctggccggtcatt
gatggcagcctgcactggtccctactctccgccatgaacctgaattatctgtcattactg
gatacggacgcgctgaagcaggtcatcgccaactttgatcgccacgcaatccatcatccg
cagacggcacggctgtcacaacaaaagctggatgccattgagcgtctggagacccgcccc
gttgatcgcctgtttacgggtattcccgtccggggactggcctccacgctgtatctgcac
ccggagccgtttgtctgtgaaggggaaatgtatctgctcggtacggtgctttcgcatttt
ctgtcgctgtacgccagcgttaactcattccacatgctgaccgttgtgaacacagaaagc
caggagacatggaaatggacggaaagaatcgggcagcatcctcttatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

Download RDF
DBGET integrated database retrieval system