KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10002801mg
Entry
EUTSA_v10002801mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eus03016]
    EUTSA_v10002801mg
Enzymes [BR:eus01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     EUTSA_v10002801mg
Transfer RNA biogenesis [BR:eus03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    EUTSA_v10002801mg
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 18014090
NCBI-ProteinID: XP_006419023
UniProt: V4L1C1
Position
Unknown
AA seq 229 aa
SADPSSWRQGGNGKALLEPISKTVSELQSSLTRAKASGVLTSCNVLLTVEAEQAKLLDRG
CFGRPVVCAENDKRWIQLTFEEAFFLFYNLKCIKISFQGCCLENKVELWRFIRLFKPNFA
TSYKAYSHLRSKNWIVRSGLQYEVDFVVYRHHPSLVHSEYAVVVRSIEVNDRLRVWSDIH
CCVRLTGSVNGEVNREDMNLPVCLEDYTVEEHTVRRWSPELSREDENRT
NT seq 690 nt   +upstreamnt  +downstreamnt
tctgcagacccatcttcatggcgccaaggtggaaatggaaaggcgcttttggaaccaatt
tcaaaaacagtctcagagctccaatcttctttgacccgagccaaggcttcaggtgtcctc
acaagttgcaatgtcctactaaccgttgaggcagagcaagctaagcttttggaccgtggt
tgtttcggtagacccgtagtttgtgccgagaatgacaagagatggatccagttaactttc
gaagaagctttctttctgttctacaatctaaaatgcatcaagatttcctttcaaggttgt
tgcttggagaacaaggtagagttatggcgattcataagattgtttaagccaaactttgct
acatcttacaaggcttattcccatttaagatcaaagaattggattgtgagatcagggtta
caatatgaagttgatttcgtggtgtatagacatcatccgtctcttgtccactctgaatac
gcagttgtggttcggtctattgaagtgaatgaccggttaagagtgtggtcggatatccat
tgttgtgtccggctaaccggaagcgttaatggagaagtgaacagagaggatatgaatctg
cctgtgtgtttagaggattacacagtggaagagcatacagtacgtagatggagtccagaa
cttagccgtgaagatgaaaacagaacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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