KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10006086mg
Entry
EUTSA_v10006086mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10006086mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10006086mg
Spliceosome [BR:eus03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    EUTSA_v10006086mg
 Complex C
   U5 SnRNP specific factors
    EUTSA_v10006086mg
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Nup160 Nbas_N DUF5074
Other DBs
NCBI-GeneID: 18020220
NCBI-ProteinID: XP_006402660
UniProt: V4LW52
Position
Unknown
AA seq 336 aa
MDIVKRENEPMEWSTVPYGAPQGPGSNGKQRTSSLEAPIMLLSGHQSAIYTMKFNPAGTV
IASGSHDREIFLWRVHGDCKNFMVLKGHKNAVLDLHWTSDGSQIVSASPDKTVRAWDVET
GKQVKKMAEHSSFVNSCCPSRRGVPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVS
FSDAADKIFTGGVDNDVKVWDLRKGEVIMTLEGHQDTITGMSLSPDGSYLLTNAMDSKLF
VWDMRPYAPQNRGVKIFEGHQHNFEKNLLKCAWSPDGSKVTAGSADRMVHIWDTASRRIL
YKLPGHNGSVNESVFHPHEPIIGSCGGDKQIYLGEI
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggatattgtcaaaagagagaatgagccaatggaatggtcaacagtcccctacggtgct
cctcaaggacctggctccaatggcaagcaacggacgtcaagcttagaagcgcctataatg
ttgctaagtggacaccaaagtgctatctacaccatgaaattcaaccctgccggaaccgtg
atcgcctctggatctcacgacagagaaatcttcctctggagagttcacggagactgcaaa
aactttatggttttgaaaggtcacaagaacgctgtcctcgaccttcactggacaagtgat
ggctcccagattgtatcagccagtccagacaaaaccgttagagcctgggatgtcgaaaca
ggtaaacaagtcaagaaaatggctgaacactcgtcatttgtgaattcttgctgtccttcc
cgtcgaggagtgcctcttatcgtaagtggatctgatgatggaactgcaaagctttgggac
atgcgtcaaagaggagccatacaaacattccctgataaataccaaatcacggccgtgagt
ttctctgatgcagccgataagatattcactggcggtgtggacaacgatgttaaagtatgg
gacttgaggaaaggcgaagtgatcatgacccttgaaggccatcaagatacgataacaggt
atgagcctaagtccagacggatcttaccttctgactaatgccatggacagtaagctcttt
gtatgggatatgcgtccttacgctccacagaatcgaggtgtgaagatctttgaagggcat
caacacaactttgagaagaacttgttgaaatgtgcttggtcaccagatggtagtaaagtc
acagcaggtagtgcggatcgaatggttcatatatgggacacggcgtctaggcggattctg
tataagctccctggtcacaatggatccgtcaatgagtctgttttccatcctcacgaacca
atcattggatcttgcggtggtgataaacagatttatctaggtgagatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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