KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10014073mg
Entry
EUTSA_v10014073mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K15685  E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10014073mg
   04131 Membrane trafficking [BR:eus04131]
    EUTSA_v10014073mg
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10014073mg
Enzymes [BR:eus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     EUTSA_v10014073mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    N6-methyltransferase complex
     EUTSA_v10014073mg
Membrane trafficking [BR:eus04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    EUTSA_v10014073mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    EUTSA_v10014073mg
SSDB
Motif
Pfam: zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf_Hakai zf-C3HC4
Other DBs
NCBI-GeneID: 18019472
NCBI-ProteinID: XP_006398649
UniProt: V4LCK1
Position
Unknown
AA seq 334 aa
MLQIRLRRDSPTETGNGARPSPTETVTVACPDHLVLADLPVAKGIGSVTPTTVIKPVGRR
SRRQLGERVHFCVRCDFPIAIYGRLIPCDHAFCLECARSDSICYLCDERIQKIQTIKMME
GIFICAAPHCLRSFLKKPDFEAHVHQLHGSLLQADAEKEDDNESDVQSTKQQSSASESTL
RGPLRSQQQQSREQQPLLHRSASMSKPQSGFGQVQNYPAESDNSRPPGFETASPKPGIRF
PDYPPMNLMQPPSLPIPMNQNPGLPQQFGFPSAYPTTDGSSPQFYSGAPYEMNRAEGSGT
EQGSLLGHPPPQMMNLNFQGSYPPQSPWTEPRSS
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgcttcaaattcggctaaggagggattcgccgacggagacaggtaatggagcgagacct
tctccgacggagacagtgacggtagcttgtcccgaccacctcgtcctcgccgatcttcct
gtcgcgaaagggatcggttccgttacccccaccaccgtaatcaagcccgtcggtcgccgt
tctcgccgccagttaggcgagagagttcacttctgcgtccgttgcgattttccgatcgcc
atctatggtcgtctgattccttgtgatcatgcgttttgcctcgaatgtgctcgtagtgat
tccatttgctatctatgtgatgaacggattcagaagattcagacaatcaagatgatggaa
ggaatcttcatctgtgcagctcctcattgtctcaggtctttcctgaagaaacctgacttt
gaagcgcatgtccatcaactccacggcagcctattacaagccgatgcagagaaagaagac
gataacgagtcagatgttcagagcacaaagcagcaatcttcagcttcggaatccacattg
cgaggtcccttaagatcccagcagcaacaatcccgtgaacaacaaccgttgctacacagg
tcagcatctatgtcaaaaccacagtctggatttggtcaggtccagaattaccctgcagag
agcgataactctcgtcctcccggattcgagaccgccagtcctaaaccaggaatccggttc
ccagactacccgcctatgaatctcatgcaaccgcccagcctgcccatacccatgaaccaa
aacccgggtttaccacagcagtttggttttccgtctgcttatccaacaacggatggatcg
tctccacaattctatagcggtgcaccttatgagatgaatagagcagaaggcagcgggaca
gaacaaggctcactgctcgggcatccgcctccacaaatgatgaatctgaatttccaagga
tcttatcctcctcagtcgccttggacagagcccagaagctcatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system