KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10022562mg
Entry
EUTSA_v10022562mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    EUTSA_v10022562mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eus03009]
    EUTSA_v10022562mg
Ribosome biogenesis [BR:eus03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    EUTSA_v10022562mg
SSDB
Motif
Pfam: WD40
Other DBs
NCBI-GeneID: 18026103
NCBI-ProteinID: XP_006409106
UniProt: V4M304
Position
Unknown
AA seq 798 aa
MICGGRSYVTSPPSFSNDAKKLLVCTGNTVSVFSAATGLQITSLEGHTAPVTTLIVVPAS
SAAQKILCYCWTASLDGTIRHWDFSGPELLKTIDAQLPIYSMVIPSLLSEPQQTDKRRDS
SKLVAYVSVEDTSVVREGSKELRGHIRRVNLAKERLPRGDTLKETEEPKSIVISPSGEFF
GIRHKCKIHIWDVPSGGSKNGVSRKMTLHHTKVINAFAFHPTERIIAAGDVTGRVLIWRG
FGNRKLVLGNQKKNLRTVVDMDNPGVRDEDDAESCTTWHWHSAEVNVLNFSSDGAYLYSG
GREGVLVVWQLDTGKKKFLPRIGSPLLYFMWSPDPTLSSVVCADNQIHFLKMPSMEILRT
ISGIKPPPSLPKMYEGLASTVAFDRSSGIAALCTENYCVQLYNLLNDRGISEIQVCERNH
QPGDEITVVVTAVALSLDGSVMSTTEVKLPEDGIGGLVSLKFWVSEADNKTFTLSTIVYE
PHRDAGVSAIAFNPTRSMAVSTSFGGDFKIWVCNSDKDSSWICHAVGSYKKKPMTAAAFS
GDGTVLAVAAENVITLWNPDKNILLSVLGATLTPITKLCFVGKSEFLVAASHFPKPELSV
WNTSKLSLSWSYGLRIEAVTSALDSSAFAVLALIPKTFKKSKSKKNIFRGRDGAILLFKG
SDPKPVSIWTVMKAEGGSISFIEGDKSQLRLAYVNGSHEYVVFDPNSDETHERSAIDYEG
LASHEETGDFGYTSLYGQLPDYDKKRLENDESLATPFVSSERPWETIFSGSTLNFPPLQK
LCAEFFESLMEKRTAVVE
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgatttgcggcggaagaagctatgtcacttcacctccgtcgttctccaacgacgctaag
aagctccttgtctgcacaggaaacactgtctccgttttcagcgccgccactggtttacaa
attacttcgcttgagggtcacacagctccagtgacgactctaattgttgttcctgcgtcg
agtgcggctcaaaagatcctctgctattgctggactgcgtctctcgatggtaccattcgt
cattgggatttctcaggacctgagcttttgaaaaccattgatgctcaacttccgatttac
tccatggtcattccatctctgttgagtgagcctcagcaaactgataaacgccgtgattct
agtaagttggttgcttatgtctctgttgaggatacgagtgtggtcagagaaggttccaaa
gagttgcgtggacacattcgaagagttaacctagcaaaagagcgtcttccccgcggagat
actttgaaagagacggaagaaccgaaatcgattgttatcagcccctcaggagaatttttc
ggaatccgtcacaagtgcaaaattcatatatgggatgttccttctggaggatcaaagaat
ggtgtttccaggaagatgacactacatcacacaaaggttatcaatgcttttgcatttcat
cccacggagagaattatagctgccggagatgtaacaggaagagtgttgatatggagagga
ttcggtaataggaaacttgtcttgggtaatcaaaagaaaaatttgagaacagtggttgat
atggacaaccctggggtgagagatgaagatgatgctgaatcttgcactacgtggcattgg
cactctgctgaagtaaatgtccttaatttctcatccgatggagcatatttatactcaggg
ggaagggaaggagtacttgtcgtttggcagctagacacagggaagaagaaatttttacca
agaatagggtctcccttgttgtatttcatgtggtcaccagatccaactctttcttctgtg
gtttgtgcagataatcagatccattttcttaaaatgccttccatggagatcttaaggacc
atttctggaatcaagcctcccccatcattgcctaaaatgtatgaaggtttggctagtact
gttgcttttgatcgatcttctggcatagctgctttgtgcacagagaattattgtgttcag
ctatacaatcttcttaatgaccggggaatttcggagattcaagtttgtgagagaaaccat
caacccggagatgaaatcacagttgtagtgacagctgttgctctctccctagatggctca
gtgatgagtacaaccgaggtgaaacttccagaagatggcataggaggtttagtgtccctc
aagttttgggtgtctgaagcagacaacaaaactttcaccttatcaactatcgtatatgaa
ccgcacagggatgctggtgtctcagccattgccttcaaccctacccgctccatggcagtc
agtacatcgtttggtggggacttcaagatatgggtttgcaacagcgacaaggactctagc
tggatatgtcacgcagttggctcttataaaaaaaagccaatgactgctgctgctttctct
ggagatggcactgttctggctgttgcggctgagaatgttattacgctttggaatccggac
aagaacattctcttgtctgttttaggagcgactctaacgccaatcacaaagctgtgtttc
gttgggaagtctgagttccttgttgctgcatcccattttccgaaacccgagttatctgtt
tggaatacatcaaagctatctttatcatggtcgtatggattacgcatagaagctgtcact
tctgcattagattcatcggcttttgcagtcttggctctgatcccaaaaacttttaaaaag
agtaaatctaaaaagaatatcttccggggtagagatggtgccattctcttgtttaaagga
tcagatcctaagccggtatctatatggaccgtaatgaaggctgagggaggatcaatctca
tttatagaaggagacaagtctcagcttcgtcttgcatatgtaaatggaagccatgagtat
gttgtttttgatcctaatagcgatgagacacatgagcgtagcgccattgactacgagggt
cttgctagtcacgaagagacaggagatttcgggtacacgtcgctttacgggcagttacca
gactatgacaagaagagattggagaatgatgagtcgttggcaacaccgtttgtgtcgtca
gagagaccgtgggaaacgatattcagcggttctacactaaatttcccgcctcttcagaaa
ctatgtgctgagttctttgagtcactaatggagaaaagaacagccgttgtggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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