KEGG   Ficedula albicollis (collared flycatcher): 101813736
Entry
101813736         CDS       T02815                                 
Symbol
POP1
Name
(RefSeq) POP1 homolog, ribonuclease P/MRP subunit
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101813736 (POP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fab03009]
    101813736 (POP1)
   03016 Transfer RNA biogenesis [BR:fab03016]
    101813736 (POP1)
   03029 Mitochondrial biogenesis [BR:fab03029]
    101813736 (POP1)
Enzymes [BR:fab01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     101813736 (POP1)
Ribosome biogenesis [BR:fab03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     101813736 (POP1)
Transfer RNA biogenesis [BR:fab03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    101813736 (POP1)
Mitochondrial biogenesis [BR:fab03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    101813736 (POP1)
SSDB
Motif
Pfam: POP1_N POPLD
Other DBs
NCBI-GeneID: 101813736
NCBI-ProteinID: XP_005042390
Position
2:134963326..134986092
AA seq 1007 aa
MSGAREKKRAKKMRNQPASVTLPAEPGPFAGGGSRACPPPGDAHSEQQQKFSNQSSGPSY
RKDQYFSKGQSRGERGRGRGGWQGGHQSVSEEMPKYITVSTFAQARAAEIKAMLKAVSQK
SSNSLVFQTLPRHMRRRAMSHNVKRLPRRLQEMAKKEAEKAVHQKKEQSKTKCRKARRRH
VNLVAEFNHRQRKNIWLETHIWHAKRFHMIKKWGYCLGNSPTEKSYRACYRAMTKHCLLQ
DLSYYCCLELKGKENELLKQLARICSIDTGLTFQEVSCLSGRFEGCLNLYRADRYPEDML
GPVTFIWKPRDGSENRQLWIWVHPALKQDILRELKAIFQCSEPEEVCITEPVTTSIQEEK
QVEVVMRLGNKRKKEDKEGEKAVPVKKIIGDGTRDPFQSYSWIAQTSGVAISDRSMEILR
YRLIGPLSNSVLTETLKAASVQTEMADSETELNNWWVENCKDSAKVSLHQCQSAIFELLE
GMSSPSDMPPGTILGLTVGDPRVNLPKKKTKAMPDFQKYQDNDKVRQLYLKGVPADCAHS
FIWDHDICKNVTENKISEQDLNHMRAQLLVPGSHLDLGPCESKIPILLVQQPGKMAGEDR
PGWGSGWDIYLPKGWGMAFWIPFIYRGVRVGGLQEALKHSEYQRIPHTPNDFPDCQAGMQ
FAKELETSLLEKFKRHPPAKRANYVKLGTLSPFICPWGQLTKNWEGRMKASGGFLCPSSP
HSDCCTTEGQTLCDPKAEVVREASPETGEAEETMEVMSSEGALKTEDVTSTQDSGERDEM
KTSDFIVLRSEKLLMQLSAWCYPTAGKDRRIRLISRLGQKEMAEDAFLPILTRYPRALIW
VNLSLLRKGNPELHAMICIPTEDDLLQLSKDKLFCGPQEPKHRDIFKDKVQKQKEKKKKK
KDNVKSLESDPAGILDEGATEDHEDLILGLWSDALPDVTSHCSRTVLGYVTRGDFSLAAG
CGEALGFVSLTGLIYMLHNQPADKKGLVLLRTPASLQYRFARLTIEV
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgtctggggcgcgggagaagaagcgagccaagaagatgaggaaccagccggccagcgtc
acgctgcccgcggagccggggcccttcgccggcggcgggagcagagcctgcccgccccca
ggagatgcccattctgagcagcagcagaaattttcaaatcagtcatctgggccttcttac
aggaaagaccaatatttttcaaaggggcaaagtagaggagagagaggcagaggaagagga
ggatggcaaggaggacaccagagtgtatctgaggaaatgccaaaatatataacagtgtct
acctttgctcaagctcgagctgctgagatcaaggccatgttgaaagcagtttcacagaag
tcttccaactccctggttttccagactctccctaggcacatgcgaaggcgagcaatgagt
cacaatgttaaacgcctgcccaggcggctccaggagatggccaagaaagaggcagaaaaa
gctgtacatcagaagaaagaacaatcaaagactaaatgccgcaaagctagaagacgccac
gtaaatttggtagcagagtttaatcacaggcaaagaaagaatatttggctggaaacccat
atttggcatgcaaagagatttcatatgataaagaaatggggatactgtttaggaaacagc
cctacagagaagagctacagggcttgttaccgagccatgacaaagcactgccttcttcag
gacttatcgtattattgttgcctggagttgaagggtaaagagaatgagcttctgaagcaa
cttgctcgaatatgtagcattgacacaggattgacatttcaggaggtttcttgtctgtct
ggaagattcgagggttgcctgaatctttaccgagcagatcgctatcctgaggatatgctt
ggtcctgttacatttatttggaaacccagggatgggtctgaaaacagacagttgtggatc
tgggtgcatccagctctcaagcaggacatactgagggagttaaaagcaatttttcagtgt
tcagagcctgaagaagtctgtattactgagcctgttacaacatcaattcaagaggaaaaa
caagtggaagttgttatgaggcttggcaataaaagaaagaaggaggataaagaaggagaa
aaagctgtgcccgtgaaaaaaataattggtgatggcactagagatccattccagtcctac
tcttggatcgcacagacttctggcgttgcaatcagtgacagaagcatggagattctcaga
taccgactgatcggcccattatcgaactctgtccttacagagacactgaaagcagcctct
gtccaaacagagatggcagattctgagacagaactgaataactggtgggtagaaaactgc
aaggactctgcaaaagtatctcttcatcagtgtcaaagtgctatctttgagctattggaa
ggaatgagctcaccatcagatatgccaccaggtacaatacttggcctcactgttggagat
cctcgagttaatttgccaaaaaagaagacaaaagccatgccagactttcaaaaataccaa
gataatgataaagttaggcagctgtacctgaagggtgtacctgcagactgtgctcacagc
tttatctgggaccatgacatctgtaagaacgtcactgaaaataaaatctcagagcaggat
ttaaaccatatgagagctcagttactggtacctggatcacaccttgatttgggtccttgt
gaatctaagattcccatactgttggtgcagcagccggggaaaatggctggagaagatcga
ccaggatgggggagtggctgggatatctatctcccaaagggctggggcatggctttctgg
atcccttttatatatcgaggtgtacgagtcggtggcttgcaagaggcattaaaacattct
gaataccaaaggatacctcacactccaaatgatttcccagactgccaggcaggaatgcag
tttgccaaagaactggaaaccagtcttcttgaaaaattcaaacgacatccacctgcaaaa
agggcaaattatgtcaagctgggcactctgtctcctttcatctgtccttgggggcagctg
accaaaaactgggaaggaagaatgaaagcttcaggaggatttttatgtccttcttcccca
cactctgactgctgcacaactgaagggcagaccctttgtgaccccaaagcagaagtggtc
agagaagcttcccctgagactggtgaggcagaggagaccatggaagtaatgagttctgaa
ggtgccctaaagacagaggatgttacaagcacccaagattctggtgagagagatgaaatg
aagacaagtgactttattgttctcaggagtgagaaactactaatgcagttatcagcctgg
tgttatcccactgctgggaaagatcggcgaatccgccttatttctcgactgggacagaag
gaaatggctgaagatgcttttttgccaatcttgacgagatacccaagggctctcatctgg
gtcaacttgtcactcttgagaaaggggaaccctgaattacatgccatgatttgcatccca
acagaagatgacttgctgcagctaagcaaagacaaactcttctgtggtccacaagaaccc
aaacatcgtgacatattcaaggacaaggtacagaagcaaaaagagaagaagaagaagaaa
aaggataatgtgaagtctctagagagtgaccctgcaggcattctggatgaaggagcaact
gaggaccatgaagacctcattcttggtctttggtcagatgctctcccagatgttacttcc
cactgctccaggactgtcttggggtatgtcactcgaggggatttttccttggctgcaggc
tgtggagaagcactgggttttgttagcttgactgggttaatttatatgttacacaaccag
ccagcagataaaaaagggcttgttttgttaaggactccagcatctttacagtacagattt
gcaagacttactattgaggtttaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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