KEGG   Ferrimonas balearica: Fbal_0111
Entry
Fbal_0111         CDS       T01318                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
fbl  Ferrimonas balearica
Pathway
fbl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:fbl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Fbal_0111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fbl03021]
    Fbal_0111
   03400 DNA repair and recombination proteins [BR:fbl03400]
    Fbal_0111
Enzymes [BR:fbl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Fbal_0111
Transcription machinery [BR:fbl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Fbal_0111
DNA repair and recombination proteins [BR:fbl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Fbal_0111
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ADN74325
UniProt: E1SW25
Position
complement(136033..136311)
AA seq 92 aa
MARVTVEDAVDKIGNRFDLILVAARRARQLSVQGKEALVEVENDKSTVVALREIEQGLIN
SAALDEQERQAQREQEAAELAAVAAIAEGRTL
NT seq 279 nt   +upstreamnt  +downstreamnt
atggcacgggttactgtagaagacgccgtagacaagatcggcaaccgttttgacctgatc
ctggtagcggcacgtcgcgctcgccaactgtccgtacagggcaaagaggcgctggtggaa
gtggaaaacgataaatcaaccgtggttgccctgcgcgaaatcgagcaaggcctgatcaac
tctgccgccctggacgagcaagagcgtcaggcgcagcgcgagcaagaagcggccgaactg
gctgccgttgccgcgatcgccgaaggtcgtaccctgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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