KEGG   Felis catus (domestic cat): 101095875
Entry
101095875         CDS       T02385                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
fca  Felis catus (domestic cat)
Pathway
fca03440  Homologous recombination
fca03450  Non-homologous end-joining
fca04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:fca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    101095875 (RAD50)
   03450 Non-homologous end-joining
    101095875 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    101095875 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fca03032]
    101095875 (RAD50)
   03400 DNA repair and recombination proteins [BR:fca03400]
    101095875 (RAD50)
DNA replication proteins [BR:fca03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    101095875 (RAD50)
DNA repair and recombination proteins [BR:fca03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     101095875 (RAD50)
    BRCA1-C complex
     101095875 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     101095875 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N Crescentin AAA_29 DUF2703
Other DBs
NCBI-GeneID: 101095875
NCBI-ProteinID: XP_003980802
EnsemblRapid: ENSFCTG00005021447
Position
A1:109279977..109369575
AA seq 1312 aa
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLISSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRERQEKETEIANQMMNDFAE
KETMKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKIEVISLQSEKADLDRTLRKLDQEMEQINHHTTTRTQMEM
LTKDKSDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHLNNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLGRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKFQQEKEELINKKNASNKIAQDKMNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNKVIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNDHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSKYVEKFYRIKKNIDQCSEIVTCSVSSLGSYVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcccggattgaaaagatgagcattctgggtgtgcggagttttggaatagaggacaaa
gataagcaaattattacttttttcagcccccttacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttatagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacgctgcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatttgaagcaaaacaaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagctcagttaatatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctttctaaaataatgagacttgacaatgaaatcaaagccttggatagccgaaagaag
cagatggaaaaagataatagtgaactggaacagaagatggaaaaggtttttcaagggact
gatgaacaactaaatgatttatatcacaatcaccagagaacagtgagggagaaagaaagg
agactgatagactgtcagcgtgaactggaaaagttaaataaagaatcaagacttctcaat
caggaaaaatcagaactgcttgttgaacagggtcgtctacagctacaagcagatcgccat
caagaacatatccgagctagagattcattaattcagtctttagcaacacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacaaacttgtg
agagagagacaagagaaggaaacagaaattgccaaccaaatgatgaatgactttgcagaa
aaagagactatgaaacaaaaacagattgatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcggacaggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagctcta
aaaatagaagtaataagccttcaaagtgagaaagcggacctagacaggaccctgcgtaaa
ttggaccaagagatggaacagataaaccatcatacgacaacacgtacccagatggagatg
ctgaccaaagacaaatctgacaaagatgaacaaatcagaaagataaaatctcgacacagt
gatgaattaacttcattgttagggtattttcccaacaaaaagcagcttgaagactggctt
catagtaagtcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatttaaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacagacttaaggaagaaattgaaaaatcctcaaaacaacgagccatgctggct
ggagccacggcagtttactcccagttcattactcagctaacggatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttacagtctaagctgcggcttgctccagataaactcaagtcaacagaatcggaactaaag
aaaaaagaaaaacggcgtgatgaaatgctgggacttgtccccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcaaaatgtcaacagagac
atacagcgcttaaagaatgacatagaagaacaggaaacactcttgggcacaataatgcct
gaagaagaaagtgctaaagtatgcctgacagatgttacaattatggaaagattccagatg
gaactgaaagatgttgaaagaaaaattgcacagcaagcagctaagctgcaaggactagac
ttgggtagaactgtccagcaagtaaaccaggagaaacaagaaaaacaacacaagttagat
acagtttccagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacagatt
caacacttaaagagtacaacaaatgaactgaagtcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaactggaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccctttagaaacaacactggag
aagttccagcaggaaaaagaagaattaatcaataaaaaaaatgcaagcaacaaaatagca
caggataaaatgaatgatatcaaagagaaagttaaaaatattcatggttatatgaaggac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaactt
aataaagtgatagctcaactaagtgaatgtgagaaacacaaagaaaatataaataaagag
atgggaatcatgagacaagatattgatacacagaagatacaagaaagatggctacaagat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggtcttacaaatgaaaaatgatcatcagaaattg
gaagaaaaaatagataatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggaagaaattatacattttaagagagaacttcgagaacctcaatttcgggatgcg
gaggaaaagtacagggaaatgatgattgtcatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtctgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aattataactaccgagtggtgatgctgaagggagacacagccttggatatgcgaggacga
tgcagtgctggacagaaggtattagcctcactcatcattcgtctggccctggctgaaaca
ttctgcttgaactgtggcatccttgccctggatgagccaacaacaaatcttgacagagaa
aatattgaatctcttgcacatgctctcgttgagataataaagagtcgctcgcagcagcgt
aacttccagcttctggtaatcactcacgatgaggattttgtggagctcttagggcgttct
aaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
acatgtagtgttagctctctaggttcttatgttcattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (41)   

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