KEGG T02911: 102050729

Falco cherrug (Saker falcon): 102050729

Entry

102050729         CDS       T02911

Symbol

PBRM1

Name

(RefSeq) protein polybromo-1 isoform X1

K11757

protein polybromo-1

Organism

fch Falco cherrug (Saker falcon)

Pathway

fch03082

ATP-dependent chromatin remodeling

Brite

KEGG Orthology (KO) [BR:fch00001]
09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102050729 (PBRM1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fch03021]
    102050729 (PBRM1)
   03036 Chromosome and associated proteins [BR:fch03036]
    102050729 (PBRM1)
Transcription machinery [BR:fch03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102050729 (PBRM1)
Chromosome and associated proteins [BR:fch03036]
Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    102050729 (PBRM1)

SSDB

Motif

Pfam:

Bromodomain BAH HMG_box HMG_box_2

Other DBs

NCBI-GeneID:

102050729

NCBI-ProteinID:

XP_014142623

Position

Unknown

AA seq 1709 aa
MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEED
EDEEGHDNQGTNSELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYY
AIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFN
MKKAEIEHSELAKSSLRIRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQGD
RLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNN
QGQLISEPFFHLPSKKKYPDYYQQIKAPISLQQIRTKLKNHEYETLDQLEADLNLMFENA
KRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIR
KQRMKILYNAVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDK
YVGEEAMIEDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASPKL
KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVT
IKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET
RREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIXXVDPNFPNKPP
LTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDEL
CKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAG
LSSLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFY
RPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVC
ESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKVDEEKHAETLEDS
KVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGR
IEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCVVLSF
KDFLSCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQ
KEPSPLLEKKIQQLEAKFAELEGGDEDMEEMGEEEGDMTETPSMPQLQTPLASELDIMPY
TPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWR
NLEATKKAEYEERAAKVAEQQERERAAQQQNSSPRAGTPVGALMGVVPPPTPMGMLNQQL
TPVAGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIG
QNVSPMVGTPAPGASPFGQQMGILGPPGQQAPPPYPGQSPASQPVMQQPTTPMFVSPPPK
TQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHS
TMADALWRLRDLMLRDTLNIRQAYNIENV

NT seq 5130 nt +upstreamnt +downstreamnt
atgaggagactggcttttcgaggtgctggttgtactctgaagaagttggattccatgggt
tccaagaggcgaagagctacctcaccttccagcagcgtcagtggaggagattttgatgat
ggccaccactccacaaacataccaggcccaagcagaaagaggaggagactttccaatctc
ccaactgtagatcctattgctgtatgccatgaactttacaacaccatcagagattacaaa
gatgaacagggcaggctcctttgtgagcttttcattagggcaccgaagcgaagaaatcag
ccagattattatgaagtggtttctcagccaattgatttaatgaaaatccagcagaagcta
aagatggaggagtatgatgatgtgaatgtgctgactgctgattttcagcttctctttaac
aatgcgaaggcttactataagcctgattctcctgaatataaagctgcctgcaaattatgg
gagttgtatttgcgcacaaaaaatgaatttgttcaaaaaggtgatgctgaggaggaagac
gaagatgaggaaggacatgacaatcaaggcacaaattctgaattatcatcgccaggttac
ctgaaggaaattcttgaacagcttcttgaagctgtagctgttgccacaaacccatcagga
cgcctcataagtgaactgtttcagaaacttccttctaaagtgcaatatccagattattat
gcaataataaaggagcccatagatcttaaaactattgcccaaaggatacagaacggaacc
tataaaagcattcatgcaatggccaaggatatagatcttctggcaaagaatgctaaaacc
tacaatgagcctggatcacaagtattcaaggatgcaaatgcgattaagaaaatatttaat
atgaaaaaggctgaaattgaacacagtgagttggccaaatcaagtctccgaatcaggact
ccatcaaatttgactgcttccaagctgacaggtccttcctcacagggtaaaggcagtgtt
ggtgatgagagaaattcttctaacaaatattatcgtaacaaaagatcagcccaaggtgat
cgtttgtcagcaataaccatggcgttgcaatatggatcagaaagtgatgaggatgcagct
ttggctgctgctgctcgttatgaagagggagaatctgaagctgagagcattacttcattc
atggacacttctaatccgctttatcagctttatgacacagttagaagttgccgaaataat
cagggccagctcatatctgaaccctttttccacttgccctccaagaagaaatatcctgat
tattatcagcaaattaaagcacctatttcattgcagcagatcagaaccaaactgaagaac
catgaatatgaaactttagatcagttggaggctgatctgaacttgatgtttgaaaatgcc
aagcgctacaatgttcccaattctgctatctacaaaagagtactgaaaatgcagcaggtt
atgcaggcaaagaagaaggagcttgctaggagagatgatattgaggatggggacagtatg
atttcttctgctacatctgatactggcagctcaaaaaggaaaagcaaaaaaaatataaga
aagcaacgaatgaagatcttatataatgcagttttggaagcacgagaaccaggcacaggc
agacggctttgtgatctgtttatggttaagccatccaaaaaagactatccagactattat
aaaattatcttggagccaatggacttgaaaatgatagaacacaacatccgcaatgacaag
tacgtgggggaagaagccatgattgaagacatgaagctcatgttccgaaatgcaaggcat
tataatgaggagggctcccaggtatacaatgatgcccatatgctggaaaagatccttaaa
gaaaaaaggaaagaactgggacccctagctgaagatgatgatgttgcatcccctaaacta
aagctaagtcgaaaaagtggcatttctcctaaaaaatcaaaatacatgactccaatgcaa
cagaaattgaatgaggtgtatgaagcagttaagaattacacggataaacgaggcaggcga
ctgagtgccatcttcttgaggctgccatctcggtctgaacttcctgactattatgtaacc
attaaaaagcccgttgacatggagaagatcagaagtcatatgatggcaaataaataccag
gatatcgattccatggtagaggactttgtaatgatgtttaataacgcttgcacatataat
gagccagaatctttgatttataaagatgctctggttctgcataaagttttgcttgaaact
cggagagaaatagaaggagatgaggattctcatgtgcccaatgtcactttgctaattcag
gaacttatccataacctgtttgtatctgttatgagccaccaggatgatgagggcagatgc
tacagtgactccttagctgagattnnnnctgttgatcccaacttcccaaataaacctcct
ctgactttcgatattatccgaaaaaatgttgaaaataatcgctatagaagactggacttg
ttccaggagaatatgtttgaggtactggaaagggcaaggagaatgaacaggactgattcg
gagatttacgaggatgcagttgaacttcagcagttctttattaaaattcgggatgaactt
tgtaagaatggagagattcttctgtcacctgctctcagctataccaccaagcatcttcac
aatgatgtggaaaaggaaaagaaggaaaagctgcccaaagaaatagaggaggataagctc
aaaagagaggaggagaagagagaagctgaaaagagtgaagattcttctggatcagctggg
ctgtcaagcttgcatcggacctacagccaggattgcagcttcaagaacagcatgtaccac
gtaggagattatgtgtatgtggagcctgctgaagccaacttgcaacctcacatagtctgt
attgagaggctgtgggaagattcagctggagagaaatggctatacggatgttggttttat
cgaccaaatgaaacgtttcatcttgcaacacgaaaattcttggagaaagaagtttttaaa
agtgactattacaataaagttcctgttagcaaaattttaggcaaatgtgtggtcatgttt
gtcaaggaatattttaaattgtgtcctgaaaacttcagagatgaggatgtctatgtctgt
gagtcacgttactctgcaaagacaaaatcttttaaaaagattaaactgtggactatgcct
gtaagctctgtaagatttgtcccacgagatgtccccctgcctgtggtccgtgttgcttct
gtgtttgctaatacagacaaagtagatgaggagaaacatgctgaaacattggaagacagt
aaggtgggagaaagtatccttcatcttgaaaaggacaaagaagatgttccagtagaaatg
tccaatggagaacctggttgccattactttgaacagctctgctacaatgatatgtggctt
aaggttggggactgtgtcttcataaaatcacatgggttagtgcgacctcgagtaggacga
attgaaaagatgtgggtgcgagatggagctgcgtatttctttggtccaatctttatacat
cctgaagaaactgaacatgaaccaactaaaatgttctacaagaaggaagtatttttgagt
aacttggaggagacctgtccgatgacttgcattttgggaaagtgtgtagttctgtcgttc
aaagacttcctctcctgcagaccaacagaaatctctgaaaacgatgtttttctttgtgag
agccgctacaatgaaagcgacaaacaaatgaagaaatttaaagggctgaagaggttttca
ctctctgcaaaagttgtagatgacgaaatatactattttagaaaacccatagttcctcag
aaggagccatctccactactggaaaagaaaattcagcagctagaagcaaaatttgctgag
ttggaaggaggagatgaggacatggaagagatgggagaagaggaaggtgatatgacggaa
acaccttctatgcctcagcttcagactccattagctagtgaattggatataatgccttat
actccaccacagtccactcccaagtctgttaagggcagcaccaagaaggagggatcaaaa
aggaagatcaacatgagtgggtacatcttatttagcagcgagatgagagctgtgattaaa
gctcagcacccagactactcctttggagagctcagcaggcttgtaggaactgaatggaga
aacttggaagcaacaaagaaagcagaatatgaagagcgggcagctaaagttgctgagcag
caggagagagagcgagcagcacagcagcagaattcctccccccgggcaggcactcctgtc
ggggctcttatgggggtggtgccgccaccaacaccaatgggaatgctcaatcagcagttg
acacccgttgcaggcatgataagtggctatccaccggtgctgccacctttgcagggccca
gttgatggcattgttagcatgggcagcatgcagccacttcacccaggggtgcccccaccc
caccaacttccgccaggtatgccaggcatcccaggcatcccaccacccggtgttataggc
caaaatgtgtcccccatggtaggcactccagcacctggagcaagtccttttggacagcag
atgggaatccttggcccgccgggacagcaggcaccccctccgtatcccggccagagccca
gcaagtcagccggttatgcagcagcccacaactcccatgttcgtctcccctccaccaaag
acacagaggcttcttcattctgaagcctatctgaaatatattgaggggcttagtgctgaa
tcaaatagtattagcaagtgggaccagacacttgcagcacgaagacgagatgtccactta
tcaaaagaacaagagagccgactcccttcacactggttgaaaagtaaaggggctcatagc
acaatggccgatgcattatggcgtctgcgagacttgatgctacgagacacccttaacatc
cgtcaggcgtacaacatagaaaatgtttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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