KEGG   Flavobacterium commune: BIW12_02065
Entry
BIW12_02065       CDS       T05006                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
fcm  Flavobacterium commune
Pathway
fcm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BIW12_02065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fcm03400]
    BIW12_02065
DNA repair and recombination proteins [BR:fcm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BIW12_02065
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BIW12_02065
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 UB2H DUF87 AAA_16
Other DBs
NCBI-ProteinID: AOZ98325
UniProt: A0A1D9P876
Position
501015..503006
AA seq 663 aa
MKFQVVSDYQPKGDQPQAIEKLAQGIEAGEQFQTLLGVTGSGKTFTVANVIQEVQRPTLV
LAHNKTLAAQLYSEFKQFFPNNAVEYFVSYYDYYQPEAFMPITGVFIEKDLSINEELEKM
RLSTTSSLLSGRRDILVVASVSCLYGIGNPVEFQKNVIALERDQEISRTKLLHSLVQSLY
SRTEADFTPGNFRIKGDTVEIFPSYADDAYRIHFFGDEIEEIESFDVQSSKVIERFDKLT
IYPANMFVTSPDVLQGAIWEIQQDLVKQVDYFKEIGKHLEAKRLEERTNFDLEMIRELGY
CSGIENYSRYLDGRQAGTRPFCLLDYFPKDYLMVVDESHVTLSQVHAMYGGDRSRKENLV
EYGFRLPAAMDNRPLKFDEFEAMQNQVIYVSATPADYELQKCDGVYVEQIIRPTGLLDPV
IEIRPSLNQIDDLIEEIQQRCELDERVLVTTLTKRMAEELAKYLTKVSIRCRYIHSDVDT
LERIEIMQDLRKGIFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTVGRA
ARNLNGKAIMYADKITDSMQKTIDETNYRRSKQINFNTVNNIVPQALNKKIDSAFTKNPL
VEYELGHTIPTAAEPENQYLSKTEIDKLIREKRKSMEKAAKELDFMQAAKLRDEIKKLQE
QLA
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaaattccaagtcgtatcggattaccaacccaaaggagaccagcctcaggcaattgaa
aaattagctcaagggattgaagctggcgaacaattccaaacacttttaggtgttacaggt
tcgggaaaaacatttacggtggccaatgtcattcaggaagtacaaagacctacactggtt
ttggcgcacaacaaaactttagcagcacaattgtactcagaattcaagcagttcttcccc
aacaatgccgtagaatattttgtttcttattacgattattaccagcctgaagcttttatg
cctattacaggcgttttcatcgaaaaagatttatccatcaacgaagagctggaaaagatg
cgtttgagcactacttcttcgctgctttcgggacgaagagacattctggtggtagcttcg
gtttcttgtttgtacggtatcgggaatcccgtggaatttcagaaaaacgtaattgcattg
gaacgggatcaggaaatttcgagaaccaagttattgcactccttagtacaaagtttatat
tccagaaccgaggccgattttacacccgggaatttcagaattaaaggcgatacagtggaa
attttcccaagttatgccgatgatgcctatcgcattcacttttttggtgacgaaatcgaa
gaaatagaatcttttgatgttcaatcttcgaaagtaattgaacgatttgataaactgacc
atttacccggctaatatgtttgtgacttcgccagatgtgttgcaaggtgctatttgggaa
atccagcaggatttagtcaaacaagtcgattatttcaaagaaataggcaaacatctcgaa
gccaaacgattggaagaaagaactaattttgacttagaaatgattcgggaattgggttat
tgttccggaatcgaaaattactctcgttatcttgacggcagacaggccggaacacgccct
ttctgtttgttggattatttcccaaaagattatctgatggtcgttgacgaaagtcacgta
acactttctcaggttcacgccatgtacggaggcgacagaagccgaaaagaaaatttggtg
gaatacggctttagacttcccgcagccatggacaaccgaccgttaaaatttgacgaattt
gaagcgatgcaaaatcaggtgatttatgtttcggcgacacctgctgattatgagttacaa
aaatgcgatggtgtctatgtggaacaaattattcgtcctacaggattattggatccggtt
atcgaaattcgtccaagtttgaatcaaattgacgatttgatcgaagaaattcagcaacgt
tgtgaactggacgaacgtgttttagtaaccactctaaccaagagaatggcggaagaatta
gccaaatatctaactaaggtaagtattcgttgtcgttatattcattcggatgtagataca
ttagaacgcatagaaatcatgcaggatttacgaaaaggaatctttgatgtgctaattggt
gtcaacttattgcgtgaagggttggatttaccagaagtttctttggttgctattttggat
gcagataaggagggatttttacgttctcatcgttcgctgacacaaactgttggtcgtgct
gcacgaaacctgaacggaaaggcgattatgtatgcggataaaattaccgacagcatgcaa
aaaacaattgacgaaaccaattacagaagaagcaaacagattaattttaatactgtcaat
aacattgttccgcaagcattgaacaagaaaatcgacagtgcttttactaaaaatcctttg
gtagaatacgaactgggacataccatacctactgcggccgaacccgaaaaccaatacctg
tcgaaaacagaaatcgacaaactaattcgtgaaaaacgaaaatcaatggaaaaagccgct
aaagaactggactttatgcaagccgcaaaattgcgtgatgaaatcaagaaattacaggaa
caactggcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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