KEGG   Flavobacterium columnare: FCOL_06680
Entry
FCOL_06680        CDS       T01653                                 
Name
(GenBank) 16S ribosomal RNA methyltransferase RsmE
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
fco  Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:fco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fco03009]
    FCOL_06680
Enzymes [BR:fco01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     FCOL_06680
Ribosome biogenesis [BR:fco03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    FCOL_06680
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4 Glyco_hydro_120_ins SUKH_5
Other DBs
NCBI-ProteinID: AEW86157
UniProt: G8X5C5
Position
1557056..1557799
AA seq 247 aa
MSFNKPLTTNKEIMQLFYNPYITIASTDFYFDKEESKHIVKVLRKKEGDILFVTNGFGFL
FETEITLASEKKCSIKINNHKTFNQTGFYLHLAVAPTKMNERYEWFLEKATEIGIHEITP
IICEHSERTSIKTDRFDKIIQSAMKQSNQFHLPKLNKAISFKDFINKDFEGQLFIAHCED
SDKKNLKKEITPNSKYTILIGPEGDFSEKEIRLAVNKGFIPVTLGNTRLRTETAAVVACH
SVVFSNE
NT seq 744 nt   +upstreamnt  +downstreamnt
ttgagttttaacaaaccattaactacaaataaagagataatgcaattattctataatcca
tatataaccattgcttcgacagatttttattttgacaaagaagaaagcaaacacatagta
aaggtattacgcaaaaaagaaggcgatattttatttgttactaatggctttggtttttta
tttgaaacagaaatcactttagcttcagaaaaaaaatgctctataaaaattaacaatcat
aaaacctttaaccaaactgggttttacttgcacctagccgttgctcctactaaaatgaat
gaacgttatgaatggtttttagaaaaagcaaccgaaataggcatacatgaaataacacct
attatttgcgagcattctgaaagaacttctataaagacagaccgctttgataaaatcatc
caatccgccatgaaacaatccaatcagtttcatttacccaaattaaacaaagctatctct
tttaaagattttattaataaagattttgaaggacaactgttcattgctcattgtgaagat
tctgataaaaaaaatttaaaaaaagaaattacgcccaattctaaatacacgatcttaatt
ggccctgagggtgatttttcggaaaaagaaatccgattagctgtaaataaaggtttcata
cctgtaactttaggaaacacaagattacgaacggaaaccgcagcagttgttgcctgtcat
agtgtggtttttagtaatgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system