KEGG   Flavobacterium columnare: FCOL_13360
Entry
FCOL_13360        CDS       T01653                                 
Name
(GenBank) exodeoxyribonuclease
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
fco  Flavobacterium columnare
Pathway
fco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FCOL_13360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fco03400]
    FCOL_13360
Enzymes [BR:fco01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     FCOL_13360
DNA repair and recombination proteins [BR:fco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     FCOL_13360
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AEW87467
UniProt: G8XBQ2
Position
3116200..3116958
AA seq 252 aa
MKVISYNVNGIRAAITKGFLEWLQAANPDVICLQEIKATQDQIPVMDIELAGYPYQYYFP
AEKKGYSGVAILSKIEPKKVVYGTGIEHMDKEGRNLRLDFDDCSVMSLYLPSGTNIDRLE
HKFMYMDDFYNYINQLKKEVPNLIICGDYNICHEAIDIHDPIRNVKVSGFLPEERAWLDK
FIKSGFIDSFRFFNTDPHHYSWWSYRANARANNKGWRIDYCLVHEPLQNKMKRAYILPEA
KHSDHCPVCVEF
NT seq 759 nt   +upstreamnt  +downstreamnt
atgaaagttatatcatacaacgtaaatggtattcgtgccgccattacaaaaggtttttta
gagtggctacaagcagcaaatcctgatgttatttgtttgcaagaaataaaagctactcaa
gatcaaatacccgtgatggacattgaattagcaggttatccgtatcaatattattttcct
gcagaaaaaaaaggatatagcggagtggctattctttctaaaatagaacctaaaaaagtt
gtgtacggaacgggtatcgaacacatggataaggaaggacgaaatctaagattggatttt
gatgattgttctgttatgagcctatatttaccttcgggcactaatatagatagattagaa
cacaagtttatgtatatggatgatttttataactatataaatcagctaaaaaaagaagta
cccaatcttataatttgtggtgattataatatttgtcatgaagccattgacatacatgat
ccgataagaaatgtaaaagtttctggttttttacctgaagaacgagcatggttggataaa
tttataaaatcaggatttatagatagtttccgtttttttaatacggatccgcatcattac
agctggtggagttatcgtgccaatgcacgtgctaataataaaggctggcgaattgattat
tgcttggtgcatgaacccttgcaaaataaaatgaaaagagcctatattttgccagaagcg
aaacattcagatcattgccccgtgtgtgtagaattttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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