KEGG   Fragilariopsis cylindrus: FRACYDRAFT_165346
Entry
FRACYDRAFT_165346 CDS       T04784                                 
Name
(GenBank) ubiquitin
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03010  Ribosome
fcy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    FRACYDRAFT_165346
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    FRACYDRAFT_165346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:fcy03011]
    FRACYDRAFT_165346
   04121 Ubiquitin system [BR:fcy04121]
    FRACYDRAFT_165346
Ribosome [BR:fcy03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    FRACYDRAFT_165346
  Archaea
    FRACYDRAFT_165346
Ubiquitin system [BR:fcy04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   FRACYDRAFT_165346
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD DUF2604 Ubiquitin_5 OTU1_UBXL Dsc3_N Plexin_RBD HATPase_c Sde2_N_Ubi
Other DBs
NCBI-ProteinID: OEU12051
JGI: 165346
UniProt: A0A1E7F2T7
Position
Unknown
AA seq 76 aa
MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGG
NT seq 228 nt   +upstreamnt  +downstreamnt
atgcaaattttcgtaaagaccctcacgggtaagaccattacgttggacgtcgagccatcg
gatacgattgacaatgtcaagactaagattcaagacaaagaaggaatcccaccagatcaa
caaagattaatctttgctggaaaacaattagaagatggacgtacgttgagcgactacaac
atccagaaggaatcgactcttcatttagtgttacgtcttcgtggtgga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (350)   
   KEGG ORTHOLOGY (1)   
   RefGene (346)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (369)   

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