KEGG   Fragilariopsis cylindrus: FRACYDRAFT_168613
Entry
FRACYDRAFT_168613 CDS       T04784                                 
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FRACYDRAFT_168613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fcy03041]
    FRACYDRAFT_168613
Enzymes [BR:fcy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     FRACYDRAFT_168613
Spliceosome [BR:fcy03041]
 Complex C
  Other components
   Step II factors
    FRACYDRAFT_168613
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD HA2_N
Other DBs
NCBI-ProteinID: OEU17095
JGI: 168613
UniProt: A0A1E7FGD5
Position
Unknown
AA seq 658 aa
MAETGSGKSTQIPAYLEEGNKKIRSSSSSTINSSTLSSYARSICVTQPRRVAAITVATRV
AQERGCVLGTTVGYRVRFDDCSHPRKTKILYATDGMLLREAMGDPLLSRYGVVVLDESHE
RSLQTDILVSKAEEWKLPRLKVVVMSATLQISTFQSFFPESCSTIQIPGRLFPVQSVYTT
DYQDDYIDSALSTALQIHYETDIEDGGDILVFLPGQEEIEDLNQLLKRHLEEDQKGVMIC
VLYAALPPEVQMLAFAPKPKGCSRKIILATNIAETSVTLDGIRYVVDCGKHKIRDFSNST
GMESLTVQDISKAQAAQRMGRAGRVSAGICFRLYTEDAFDSMAETAVPEISRVNLAQVIL
MLKGMGVFDPLQFDYLTKPSAASIRRACQNLFALGALTENMELSNHGKKMARLPVDPIYA
HLLLHSPKYGCTHEMLTAVAMLSAENVLFRPGGGGGDQGSGSLTHKAAQAHRRFASWEGD
LPTLLNIYESWRKEAIYAPTKRGGSKSWCARNFVSGRSLARAYSVRQQLSTICNNSLDKS
GLGMDVSVSCGEDTVSFLKCACAGLFLQAAARMPSTNEASDGGKRGNSGRLYSSRGRYKT
KVGGEVASIHPTSTLFGRNPAPKTLVYTELLVTKKTYLRGVTQIREEWLVEVAPDFFK
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcggaaactggaagtggaaaatccacacaaataccagcctatctcgaagaaggcaac
aaaaaaataagatcctcgtcctcctctactatcaattcttcaacattatcatcttatgct
cgatctatttgtgttacgcaacctcgtcgtgttgctgcgataacggtagcaactcgtgtg
gctcaagaacgaggttgtgtcttaggaacaactgtaggatatcgcgtccggttcgatgat
tgtagtcatccacgcaagacgaaaattttgtatgcaacggatggtatgcttttaagagaa
gcgatgggtgatcccttactgagcaggtatggtgtggtcgttttagatgaatcccacgaa
cgatcgcttcaaacggatatactagtaagtaaagccgaagagtggaagttacctagatta
aaagtggtggttatgtcggcaacactacaaatatctacattccaatcctttttcccggaa
tcatgctcgactatacaaatacccggtaggttatttcccgtacaatctgtatatactaca
gattatcaagacgattacatcgattcggcgttgtcaactgcactacaaattcattacgaa
acggatatcgaggacggtggtgatatcctggtgtttctacccggtcaggaagaaatcgaa
gatttaaatcaattgttgaaaagacatctcgaagaagaccaaaaaggtgttatgatttgt
gttctttatgccgctctcccgccggaagtccaaatgctggcatttgctcccaaacctaag
ggatgttctcgaaaaatcatcctcgctaccaacatcgcagaaacctccgttacgttagac
gggattcgttatgtagttgattgtggcaaacataaaattcgtgatttctccaactcgaca
gggatggaatctttgacggtacaagatatcagtaaagctcaagcggcgcaaaggatgggc
cgtgccggacgtgtaagcgctggaatatgcttccgtctttacaccgaggatgcatttgat
agtatggcagaaactgctgttcctgaaatctcccgtgtaaatctagctcaagtaatttta
atgctgaagggaatgggcgtcttcgatccgcttcaatttgactatttaactaagcccagc
gctgcatcgattaggcgtgcctgccaaaacttgttcgcgttaggagccttgacggaaaat
atggagttgagtaatcacggtaagaagatggctcgattgccagtggatcctatttatgcc
cacttgttgctacacagtcctaaatatggatgtactcatgagatgctgacggcggtagct
atgctatccgctgaaaatgttttgtttcgacctggtggaggaggaggagatcaaggaagt
ggaagtttaacgcataaggctgctcaagctcaccgacgatttgcgagttgggagggtgac
ctaccgacattattaaatatatatgaatcctggcgaaaggaagcaatatatgcaccgaca
aaacgaggtggatcgaaatcgtggtgtgcacgtaattttgtaagtggtcggtctttagca
cgagcatacagcgttcggcaacagcttagcaccatatgcaataatagtcttgataaaagt
gggcttggtatggatgtctcggtatcttgtggagaagataccgtctccttcttgaaatgt
gcctgtgcgggtctctttctccaggcagctgctcggatgccgtctaccaacgaggcaagt
gatggtggtaaacggggcaattctggtcgactttattcatcaagaggacgttataagacc
aaggttggcggcgaagtagcatccatccatccaacttccactcttttcggtcgcaacccg
gctcctaagactctggtgtacacggagctactcgtgacgaaaaagacttatcttcgggga
gtgacgcagattcgagaagagtggttagtagaagttgcaccagatttcttcaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (68)   
   KEGG ORTHOLOGY (1)   
   RefGene (64)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (79)   

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