KEGG   Fragilariopsis cylindrus: FRACYDRAFT_181706
Entry
FRACYDRAFT_181706 CDS       T04784                                 
Name
(GenBank) vacuolar protein sorting-associated
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    FRACYDRAFT_181706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fcy04131]
    FRACYDRAFT_181706
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fcy04147]
    FRACYDRAFT_181706
Membrane trafficking [BR:fcy04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    FRACYDRAFT_181706
Exosome [BR:fcy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   FRACYDRAFT_181706
  Exosomal proteins of other body fluids (saliva and urine)
   FRACYDRAFT_181706
  Exosomal proteins of colorectal cancer cells
   FRACYDRAFT_181706
  Exosomal proteins of bladder cancer cells
   FRACYDRAFT_181706
SSDB
Motif
Pfam: VPS28 RSF DUF6886
Other DBs
NCBI-ProteinID: OEU19713
JGI: 181706
UniProt: A0A1E7FPH5
Position
Unknown
AA seq 217 aa
MNTSSYHDEGEIEEVELYSSSRERQAYDDQATLYAIILATEHLERAYARDAVTQQEYVQE
CNKLISQFRLAEKAALPKLNMTTAQFMELYQMDCPRATERLLNMGVPEPGGQTAQHHDVA
VTVAKTVENFITAMDAVKIETRFVDELQPLLSDLMDTLTKLPDIPEDFAPNDKVKKWLQK
LNGMRAIDEISEEDSRQLSMDLDSAYVEFTRYLKRNN
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaatacgtcctcgtaccacgatgaaggcgaaatagaagaagttgaattgtattcttca
tcaagagaaagacaggcgtatgacgatcaagcaacgttgtacgcaatcatattagcgaca
gaacacttagaacgtgcctacgcaagagatgctgttactcaacaagaatatgtacaggaa
tgtaataaattaatttcacaattcagattagccgaaaaggctgcattaccaaaattaaat
atgaccacagcacaatttatggaattatatcaaatggattgtccccgtgccacagaacga
ctattaaatatgggtgtacccgaaccgggtggacaaacagcacagcatcatgatgttgct
gtcacggtggccaagacggttgaaaattttattactgccatggatgctgtgaaaattgaa
actcgatttgtggatgaactccaaccgttattaagtgacctgatggacaccttaacaaag
ttgccggatatacccgaagacttcgctccgaatgataaagtaaagaaatggcttcaaaaa
ctgaatggtatgcgtgctattgatgaaatatcggaagaggattctcgtcaactctctatg
gatctagatagtgcatatgtagaatttacacggtatttgaaacgaaataattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (67)   
   KEGG ORTHOLOGY (1)   
   RefGene (63)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (76)   

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