KEGG   Fragilariopsis cylindrus: FRACYDRAFT_225788
Entry
FRACYDRAFT_225788 CDS       T04784                                 
Name
(GenBank) DNA/RNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03030  DNA replication
fcy03410  Base excision repair
fcy03420  Nucleotide excision repair
fcy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FRACYDRAFT_225788
   03410 Base excision repair
    FRACYDRAFT_225788
   03420 Nucleotide excision repair
    FRACYDRAFT_225788
   03440 Homologous recombination
    FRACYDRAFT_225788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fcy03032]
    FRACYDRAFT_225788
   03400 DNA repair and recombination proteins [BR:fcy03400]
    FRACYDRAFT_225788
Enzymes [BR:fcy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FRACYDRAFT_225788
DNA replication proteins [BR:fcy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FRACYDRAFT_225788
DNA repair and recombination proteins [BR:fcy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FRACYDRAFT_225788
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FRACYDRAFT_225788
SSDB
Motif
Pfam: DNA_pol_A DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: OEU16643
JGI: 225788
UniProt: A0A1E7FFT0
Position
Unknown
AA seq 821 aa
MDTTYEKDKFLEEEGKEETINNKDDLLEGLISKPVEGGNWVPGASLDWATDFGRRSPEYD
KLCREDETSFYHSQIQNATIVRTKEQARIVMEKLMNANPGLFHACDTEVMDIKLKEVGPV
GNGYVTCLSVYSGPNFDYGLGAPIGSTLWIDNLDDAHGILQEFKPWMEDERFKKIWHNYG
FDRHVMWNEGIDCRGFGGDTMHMARLQDTSRMKNGGGGYSLEALTSELLNMRKRPMKEIF
GVARIKKDGSPGSLVDVPPIEVLQRDPEFRKNFIAYSCYDAVGTWELHQRLVALLKKMEW
ISKDTNLFDYYWENMRYFAEVLTDMERRGIRVDAKDYLASVEVQARKDRKEHLKKFRQWA
AVIIGPDGLAINPASATQLATFLFGGSTNLKTKEPTEDVRVFKVAREEVPEDAIKALKEK
SMEKSKFIDVTVRSIGMDAIKHTAGGAPSVTADVLRELAGDPFEDPPKYGLAYNYFGGNE
RGHEACVALFSLCAIGSIDTMIANFLTSLQFLADHDSRVHCSLNLNTETGRLSSRRPNLQ
NQPALEKDKYKIRQAFQASPGNNLIVADYGQLELRLLASMTRCKSMIDAFDAGGDFHSRT
AMDMFDHVKQAVDDGDVLLEWDYSNGDPPKPLLKDKFASERRKAKTLNFSIAYGKTAHGL
SQDWGVSPTEAQEMLEKWYEARPEVRDWQANTKAYARKFGLTRTLMGRYRQLPDAMGPNQ
RFIGAAERASINTPIQGGAADVAMLAMNKINRSEKLKRLGWILMLQIHDEVILEGPEETA
IEAFDEVIDCMESPWAKGLSKTAVPLLVDGSWQHKNWYEAK
NT seq 2466 nt   +upstreamnt  +downstreamnt
atggatacaacttatgaaaaagataaatttttagaagaagaaggaaaagaagaaacaata
aacaataaagatgatttgttggagggattaatatcgaagccagttgaaggagggaattgg
gttcctggcgcgagccttgattgggctacagattttggacgaagatctccagagtacgat
aaattatgccgcgaagacgaaacatccttttatcattcccaaattcaaaatgctaccata
gttcgaacaaaagaacaagcacgtatcgttatggaaaaacttatgaatgcaaatcctggt
ctctttcatgcatgcgataccgaagttatggatattaaactaaaggaagtaggacctgta
gggaatggatacgtcacatgtttaagtgtatactctggacctaacttcgactatggactc
ggtgcaccgatcggatcgacattatggatcgacaatcttgatgatgcacatgggatatta
caagaattcaaaccatggatggaagacgaacgattcaaaaaaatctggcacaattatggt
tttgatcgccacgttatgtggaatgaaggaattgactgtaggggctttggaggggataca
atgcacatggctcgtttgcaagatacaagccgtatgaagaacggtggtggtgggtacagt
cttgaggcactaacgtcggagttgcttaatatgaggaaacgtccaatgaaagaaatcttt
ggagtcgcacgcattaaaaaagatggtagtccaggaagtctggttgatgttcctcccata
gaggtcttgcaacgagatcccgagttccgtaagaatttcatcgcatactcgtgttacgat
gctgttgggacttgggaattacaccaacgtttagtagctctgttgaagaaaatggaatgg
atttcgaaagataccaaccttttcgactattactgggaaaatatgagatattttgccgaa
gttttgacagatatggaaagaaggggaatccgagttgatgccaaggattatttggcatca
gtagaagtacaggcacggaaagatcggaaggagcatctcaagaaatttcgacaatgggcg
gctgtaataataggtccagatggtctagcgatcaatcctgctagtgctactcaattggct
acatttctttttggtggctctacaaaccttaaaactaaggaacctaccgaagatgttaga
gtcttcaaagtggcgcgagaagaggtccctgaggatgcaataaaggctttaaaggaaaaa
tccatggaaaaatctaaattcatagatgtgaccgttcgtagtattggtatggacgctata
aagcatactgcgggaggagctcctagcgttactgctgacgtacttcgcgaacttgctgga
gatccattcgaggatccacctaagtatggattggcatataattatttcggtggtaatgag
cgtggtcatgaggcgtgtgtagccttatttagcctttgcgcaataggttctatcgatacg
atgattgcaaattttctcactagtttgcaatttctggctgatcacgatagtagagtccac
tgttcgttaaatcttaacacagaaacaggacgactttcttcccgtcgaccaaatcttcaa
aaccagccagcacttgaaaaagataaatacaagatccgtcaagcatttcaagcatcacca
gggaataatttgattgttgcagattacggacaacttgagcttcgtttgttggcttctatg
acaagatgtaaatcaatgattgacgctttcgatgctggtggggactttcattctagaact
gctatggatatgtttgatcatgtgaagcaagcggttgatgacggtgacgtccttcttgaa
tgggattattcgaatggggaccctccgaaaccactattgaaggataagtttgcatctgaa
agacggaaggccaagacgctgaatttttctatcgcctatggcaagacagcacacggtctc
agtcaagattggggtgtgtcaccgacagaagctcaggaaatgttagaaaaatggtatgaa
gcacgtcctgaagttcgtgactggcaagcaaacacaaaggcgtatgctagaaagtttggc
ctcacacggacattgatgggccgataccgacaacttcctgatgcgatgggacctaaccaa
agattcatcggcgctgcagaacgtgccagtatcaacacacctatccaaggaggcgctgct
gatgtagccatgctcgctatgaacaagatcaataggagtgaaaaattgaaacgactgggt
tggatccttatgttgcaaattcacgatgaagtcattctagaagggccagaagagacggcc
atagaggcattcgatgaggttatcgattgtatggaatccccttgggcaaagggactttcg
aagaccgctgtgcctctgctagtagatggatcttggcaacacaaaaactggtacgaggcc
aaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (121)   
   KEGG ORTHOLOGY (1)   
   RefGene (117)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (134)   

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