KEGG   Flavobacterium gilvum: EM308_16065
Entry
EM308_16065       CDS       T04609                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
fgl  Flavobacterium gilvum
Brite
KEGG Orthology (KO) [BR:fgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fgl03009]
    EM308_16065
Enzymes [BR:fgl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     EM308_16065
Ribosome biogenesis [BR:fgl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EM308_16065
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AOW10876
UniProt: A0A085ELP2
Position
complement(3986846..3987886)
AA seq 346 aa
MNNNNDPIEELDEELFEHYRFEVPKGQAILRIDKYLMSLIPNATRNKIQNAASDGNIYVN
DATVKSNYKVKPFDVVQIMLSHPPFENRVDPEDIPLEIVYEDDALLLINKPPGLVVHPGH
GNYTGTLVNALAFHFENLPMNSSERPGLVHRIDKDTSGLLVIAKTEAAMTHLAKQFEAKT
TEREYVALVWGNVANDSGTIEGNLARHLKDRMQMAVFADPEIGKPAITHYKVLERFGYVT
LVSCKLETGRTHQIRAHMKHIGHPLFNDERYGGHLILKGTTFTKYKQFIENCFKVLPRQA
LHAKTLGFEHPNTGEMMRFDTELPQDFKDCIEKWRGYAKSHHAEED
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaacaataataatgatccaattgaggaattagacgaagagttatttgagcattatcgg
tttgaggttccgaaaggacaagccattttgcgaattgacaaatacctgatgagccttatt
ccaaatgctacaaggaataaaatacaaaacgccgccagcgacgggaatatttatgtgaac
gacgcgacggtaaagtccaattataaagtaaaaccctttgatgtggtacagataatgtta
tcgcatccgccttttgaaaacagggtagatccagaggatattccgttggaaatcgtatat
gaggatgatgcacttttgcttatcaacaaaccgccaggattggtggtgcatcccggtcat
gggaattacacagggactttggtgaatgctttggcctttcattttgagaatttgccaatg
aacagcagcgagcgtcccgggttggttcaccgaatcgacaaggatacttctggattattg
gttattgccaaaacggaagctgcaatgacgcatttggccaaacaatttgaagccaaaacc
accgaaagagaatatgttgcgctggtttggggtaatgttgccaatgattccggtactatt
gaggggaatttggcccgacacctgaaagaccgtatgcaaatggccgtttttgccgatccc
gaaataggaaaacctgccatcacccattataaagttttggagcgttttgggtatgtgact
ttggtttcctgcaaactggaaacgggaagaacacaccagattcgggcgcacatgaaacat
attgggcatccgctttttaatgatgagcgttacggaggtcacttaattttgaaaggaact
acgtttacaaaatacaaacagtttatcgaaaattgtttcaaagttttaccacgtcaggct
ttgcacgccaaaacacttggttttgagcatccaaataccggtgaaatgatgcgttttgat
actgaattaccacaggattttaaggattgtatcgagaaatggagaggctatgcgaaatcg
catcacgctgaggaggattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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