KEGG   Fusarium graminearum: FGSG_12776
Entry
FGSG_12776        CDS       T01038                                 
Name
(RefSeq) hypothetical protein
  KO
K12879  THO complex subunit 2
Organism
fgr  Fusarium graminearum
Pathway
fgr03013  Nucleocytoplasmic transport
fgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FGSG_12776
  09122 Translation
   03013 Nucleocytoplasmic transport
    FGSG_12776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fgr03019]
    FGSG_12776
   03041 Spliceosome [BR:fgr03041]
    FGSG_12776
Messenger RNA biogenesis [BR:fgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     FGSG_12776
Spliceosome [BR:fgr03041]
 Complex C
  Other components
   EJC/TREX
    FGSG_12776
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FGSG_12776
SSDB
Motif
Pfam: THOC2_N Tho2 Thoc2
Other DBs
NCBI-GeneID: 23559588
NCBI-ProteinID: XP_011324223
Position
3:complement(3004786..3010074)
AA seq 1607 aa
MAEHTRIINLILHHRNDDLALLTHHHRRPLRQRSRNRLTAWAEGGRDEMIQHGKQSRDDV
DITELSSLFQEFVHSVVEARLSPADAGTCVKEILGDETTEIIKDSYAFAPHTLFLDSLSI
VMDNEPVIYRPTLREFVLTAGISSNLMRQVLDHEVLQQLGLIRDNFVKLGIKQATNLLYR
QANYNLLREETEGYSKLITELFTTSSVAPPPPEMAEQTFERIKALIGTFDLDVGRVLDVT
LDVAAAVLIKQFKFFVKFLRVSSWWPRSHLKFSAAVYVGGLPLWATPEYSQWTTTEEDEK
LLEEKKRVRDVAFWSRAREVHIAAFFELGGRQVADSDSQQLTITNGSPGEDAAADIERQW
VQETKTLPPPGNRTAAQLLGFKLRFYNSDARDESDVLPANLLYLAALLIKIGFISLTDLY
PHLSPADEDMEMVREKEMKKIEEAERTAKGGPMNALLMAGVLPQGDDDNPNGSNLPRREL
PKKTEADAKEAAAEGADSKPKLPEPLEQKVALLTQLLTIGAIPESLFILGRFPWIPEVFP
EVLERIHRVLHYSVDKVFHDSRPIVNYRYYWDEWADNIPVCQTVDDIFTLCGTLLNISGV
NIGKDEVLLTKLARIGAKSLGEDRSEHNLSRWHDLLRRLLLPALSHTKANASAVNAIWEL
MRHYPMTTRYSMYAEWFEGQISRLPAMKAAFAKATSETRGTMKRVSLTNLSEMAKQLAKT
SYSSPGIVFRVAFEQLESYPNLIDAFVECAKYFTDLSYDVLVWSLMSSLGKSRSRTQAEH
ALTTSKWLQALSRFSGRVFRRYTVLNATPVLQYVNDQLIKGNSTDLIILKELITSMGGIV
DSVDFTDHQIMSMAGGEYLRRHTLIRGQDKRFDNIKSSKRLIQALTDSKLAAQLLISLAQ
YRQAALFQVPEDEAHIKYLSSMIDDSHRILIQYLDLLWSNMEPASFDSLVPSIPELINSY
GLDVGLAFMIGRASLAHRMFPWKQKKVEETKEKSQIAQSTDKEGDVTMSDTPVTNGGNDT
PGQETPQADDQTQKSEDSSLIKSALQPLVESIQDAARPETWQKITPDLYVTFWALQLGDL
YCPDRIYRQEKDRLRAEDLAISRDRSDMSRRGQERKVEKRKELMQLQIGLSEECGEHLLR
QAKWKYFLSKQFQSSFPEPRAKPDSISDTLLEQCFLPRLLLSKADAEYTYKFIKALHEGN
APGFQLMSLYDRLFNANRLRSLIFTSTVMEAEYLGRFLRLILEDLSRWHKNATVPNEKDK
SKDQPRLGAYDKEGKGSSDQPRLGFALTFDDNGKPLTFVEHEQFRDMLFRWHKNLNSALR
SCLEGAEWMHIRNAITVLKAVLDFFPAIDFMASKFSSLLQTITKQESTAKPTPDSEIGGR
VDLSVAAQGAMSELQRRKSKWVMVQAFRPGGAGPAQNESEKASLRATAPEFKPGSANPQA
LRRTCYPLSQGRPENPTRPNVTKHLQDLAPQTQVQERDHPGSMILGLIRCLNARLIPSPA
DLMCLSLLTILLIDSANLGAMSVVMVRSLETHAPEIRASLEKLVTHGISETREISTLLVQ
SVLASFLTDDHRSTVESHLDLMEDVAASMSENGPETLRAVEATIMAV
NT seq 4824 nt   +upstreamnt  +downstreamnt
atggccgagcacaccagaatcatcaacctaatcctacaccaccgcaacgacgacctggct
cttctcacgcaccaccaccgccgccccctccgccagcgatcaagaaaccgacttaccgct
tgggccgagggcggtcgggacgagatgattcagcacggaaaacaatcgcgagacgatgtt
gacatcactgagctttcgagtttgtttcaggaattcgttcactcagttgtcgaggctcgc
ttatcaccagctgatgcaggtacctgcgtcaaggaaatcctcggtgacgaaacgacggag
attattaaggattcatacgcgttcgctccccacactctatttcttgactctctatccatc
gttatggataatgagcccgttatttaccggccaaccctccgggagtttgttctgacagct
ggcatatcttcaaatttgatgcgccaagtgctcgaccatgaagtcttgcagcagctgggg
cttattagagataatttcgtcaaactgggtatcaagcaggcgacgaatcttctctatcga
caagccaactacaacttgcttcgcgaggaaaccgaaggatactccaagcttatcacagaa
ttattcacaactagcagtgtggcgcctccccctccagaaatggccgaacaaacctttgaa
cgaatcaaggcattgataggtacttttgatctcgacgtcggaagagttttggatgtgact
cttgacgttgcagctgctgtactgataaaacagttcaagttctttgtcaagtttctccgg
gtcagctcttggtggccacgctctcacctcaagttcagcgctgcagtttatgtcggcggc
ttgcctttgtgggccaccccagagtactcacagtggacaacaacagaagaggatgagaag
cttttggaggagaagaaacgggttcgtgatgttgcattctggagtcgagctcgagaagtg
catatcgcggcattctttgagttgggcggccgacaagtggcagattccgactctcagcaa
ctaaccattaccaacgggtccccaggcgaagacgctgcggccgatatcgagcgacagtgg
gttcaggaaaccaagacactaccacctccgggcaaccgtacggccgcgcagctgcttggt
ttcaagctgcgtttctacaactcagacgccagagatgaatcagacgtccttcctgcgaac
ctgctctatctggcagcccttctcatcaagatcggctttatttccctgaccgacctctac
ccccatctctcaccagccgacgaagatatggaaatggtccgcgagaaagagatgaagaag
attgaagaagcagaacgaaccgccaaaggtggaccgatgaacgctcttctcatggctggt
gttttgccccagggcgacgacgataatccaaacgggtcaaatctacctcgacgggagctt
cccaagaaaaccgaagctgacgctaaagaagctgcagcagagggggcagacagcaaacca
aagttgcctgaacccttggaacaaaaggtggcgttgctcacccagttgttgactattggc
gccattcccgaatcgttgtttattctcggccgcttcccctggatacccgaggtctttcct
gaagtgctggaaagaattcatcgcgttcttcactattctgtcgacaaagtcttccacgac
agccgacctattgtgaattatcgatattattgggatgaatgggcggacaatattcccgtc
tgccaaaccgtggacgacatcttcaccctgtgcggaacgctgctcaacatttccggtgtc
aacattggcaaggatgaggtgctattgaccaagttggccagaattggagccaagagtctt
ggagaggacaggtccgagcacaacctcagtcgatggcacgacctcctccgacggcttttg
ttgccagcgttgagtcataccaaggccaatgcttctgccgttaatgcgatctgggaactc
atgaggcactaccccatgactacccgctattccatgtatgctgagtggttcgagggtcaa
atctctcgactgcctgctatgaaggcagcttttgcaaaggcaacatcagagactcgaggc
accatgaagcgagtttctcttaccaacctcagcgaaatggccaagcaactcgccaagacc
agctactcgtctcctggtatcgtgttccgagttgctttcgaacaactggaatcctaccca
aacctgatcgatgcttttgtggagtgcgcaaagtactttacagacctgtcttatgatgtg
cttgtgtggtccctgatgagctctctcggaaagtccaggagtcgtactcaagccgagcac
gccctcactaccagtaaatggttacaagccttgtcaagattctccggtagagtcttccga
cgatacaccgtattgaacgccacgccagttcttcaatatgtcaacgaccagctgatcaag
ggcaactctactgaccttatcattctcaaggagctcatcacttccatgggtggaattgtg
gattcagttgatttcacagaccatcaaatcatgtcaatggctggaggtgaatacttgcga
cggcatactctgatccgcggtcaagataagcgatttgacaacatcaaaagctcaaagcgt
cttatccaggctttgaccgactccaaacttgctgcccagcttctcatcagcctagcacag
taccgacaagcagcactcttccaggtgccagaggatgaagctcacatcaagtacctttcc
tcgatgattgatgactctcaccgtattttgatccaatatctggacctactctggagcaac
atggaaccggccagcttcgatagtcttgtcccttccattcccgaactcattaattcatac
ggtctggatgtcggcctcgcattcatgataggtcgggcaagtcttgcccaccgcatgttc
ccttggaagcaaaagaaggttgaagagaccaaagaaaagtctcaaattgcgcagtctacg
gacaaggaaggggacgtcaccatgtccgacacgcccgttacaaatggcggcaatgacaca
cccggtcaagaaacaccacaggccgacgaccagacacaaaaatctgaagacagttctctc
atcaaatcagcactgcagcctctggtggaaagcattcaagatgctgcccgtcctgagact
tggcagaagattaccccagatctctatgtgaccttctgggctcttcagctaggcgatctc
tactgtcccgataggatttacagacaagagaaagaccgtctcagagccgaggaccttgcc
atctcacgagatcgcagcgacatgtcaagacgaggacaagaacgcaaagtggaaaaacga
aaggagcttatgcagcttcagatcggtctttccgaagaatgcggcgaacacctcctgcga
caggcaaagtggaaatatttcctgagcaagcagtttcagtcttcattcccagagcctcga
gctaaaccagacagcatttccgacacgttgcttgaacagtgcttcctccctcgcctgctt
ctatccaaagctgatgccgagtacacatacaaattcatcaaagcgcttcatgaaggcaat
gctccaggcttccagttgatgtccctctacgaccgactattcaatgccaaccgcttgagg
tctctcattttcacatcaactgttatggaggccgaatatcttggtcgtttcttgaggttg
attctggaagacttgtcacgttggcacaagaacgcaactgtccccaatgagaaggacaag
tccaaggatcagcccaggctcggtgcatatgacaaggaaggcaagggatcgagcgatcag
cctcgtcttgggtttgctttgactttcgacgacaacggaaagcccttgacatttgtagag
cacgaacagttccgggatatgctattccgctggcacaagaacctcaacagtgcccttcgt
tcctgcttggaaggcgcggagtggatgcacatccgaaacgccatcacagttctcaaggcg
gtccttgacttcttccccgcgatcgactttatggcatccaaattctcttcgctccttcag
actatcaccaaacaagagtctactgcaaaaccgacaccggacagtgagattggtggacgt
gtcgacctttcagtcgccgcacaaggtgcaatgtcagaacttcaaaggaggaaatccaaa
tgggtcatggtgcaggctttccgccctggtggtgccgggcctgcccagaacgaatcagaa
aaggcgtctctacgtgcgactgcgcctgagttcaagcctggctccgcaaacccacaggcc
ctgcgaaggacttgctacccgctaagccagggtcgtcccgagaatccaactcggccaaac
gtgaccaaacaccttcaggacctcgcgccgcaaacacaagttcaggagcgggatcatccg
ggaagcatgattctcggcctaatacgttgcctgaacgcccgcctcataccctccccagcc
gacctgatgtgcctatccctgctcactatccttctgatcgattcagccaatctaggagcc
atgagcgtcgtgatggtaaggagcctcgagacgcacgctccagagattcgcgcgagccta
gagaaactcgtgacacacgggatcagcgagactcgcgaaatttcgaccctgctcgtccag
agcgtcctcgcgagtttcctgaccgacgatcacaggagcacggtagagagccatctcgat
ctgatggaggacgtcgcagcgagcatgagcgagaacggccccgagacactaagagcagta
gaggccacgatcatggccgtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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