KEGG   Flavobacterium indicum: KQS_05545
Entry
KQS_05545         CDS       T01781                                 
Name
(GenBank) Probable DNA polymerase III subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
fin  Flavobacterium indicum
Pathway
fin03030  DNA replication
fin03430  Mismatch repair
fin03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KQS_05545
   03430 Mismatch repair
    KQS_05545
   03440 Homologous recombination
    KQS_05545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fin03032]
    KQS_05545
   03400 DNA repair and recombination proteins [BR:fin03400]
    KQS_05545
Enzymes [BR:fin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KQS_05545
DNA replication proteins [BR:fin03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KQS_05545
DNA repair and recombination proteins [BR:fin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KQS_05545
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 RuvB_N AAA_14 DNA_pol3_gamma3 AAA_5 DNA_pol3_delta_C DNA_pol3_delta AAA_30 Rad17 nSTAND3 TIP49 AAA_16 ResIII AAA_18 T2SSE DEAD AAA_24 AAA_7 AAA_assoc_2 NTPase_1 RNA_helicase AAA_28 NACHT IstB_IS21 Mg_chelatase DUF815 Sigma54_activ_2 TsaE Viral_helicase1
Other DBs
NCBI-ProteinID: CCG53074
UniProt: H8XVA4
Position
complement(1223719..1224804)
AA seq 361 aa
MEQFIVSARKYRPQTFKDVIGQQAITNTLLNAIENNHLAQALLFTGPRGVGKTTCARILA
RKINQVGYDNPNEDFSFNVFELDAASNNGVDDIRSIIDQVRIPPQTGNYKVYIIDEVHML
SQAAFNAFLKTLEEPPRHAIFILATTEKHKILPTILSRCQIFDFKRITVNDTKEYLMDIA
QNQNVQYEEEALRIIAQKADGAMRDALSIFDRVVSFCGNNLTRQAVAENLNVLDYDYYIK
VTDLILENKIPELLLTYNDILAKGFDGHHFIAGLASHFRDLLVCKNPATLSLLEVSEQVQ
DLFKNQAQKASQEFLLQGIEIANECDLKFKVSQNQRLFVELTLMQLASLTHDAEKKKLNS
I
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacaatttattgtatcagcccgtaaatacagaccccaaacattcaaggatgttatt
gggcaacaagctattacaaatactttattgaacgccatagaaaacaaccacttagcacaa
gcattacttttcactggccctagaggcgttggtaaaaccacttgtgcgcgtattttagct
cgaaaaattaatcaggtaggatacgataatccaaatgaagatttctccttcaatgtattc
gaattagatgctgcttctaataatggagtggatgatattcgtagtattattgatcaagtt
agaatacctccacaaactggaaattataaagtatatattattgacgaggtacacatgctt
tctcaagccgcttttaatgctttcttaaagacattagaagaaccgcctcgacatgctatt
tttatattagctactactgaaaaacacaaaatattacccactattctttctcgatgtcaa
attttcgattttaaaagaatcactgttaatgacaccaaagaatatttaatggatattgcg
caaaatcaaaatgtacaatatgaagaagaggccttgcgtatcatcgctcaaaaagctgat
ggtgccatgcgtgatgccttatctatttttgatcgtgtggtttctttttgtggcaacaat
ttaacacgtcaagcagtagctgaaaacttaaatgtacttgattacgattattatattaaa
gtgactgatttaattttggaaaacaaaattccggaattacttctaacgtataacgacatt
ttagctaaaggttttgatggacatcattttatagcgggattggcttcacacttcagagat
ttattagtgtgtaaaaatcctgcaacgctatcccttttggaagttagcgaacaagtacaa
gatttattcaaaaatcaggctcaaaaagcaagtcaagaatttttattgcaaggaatagaa
attgccaatgaatgtgatttgaaatttaaagtgagtcaaaaccaacgattatttgttgaa
ttaactttaatgcaactggcttcattaacacatgatgccgaaaaaaaaaagctaaattct
atataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (31)   
   Pfam (31)   
All databases (44)   

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