KEGG T04195: FIS3754

Fischerella sp. NIES-3754: FIS3754_31200

Entry

FIS3754_31200     CDS       T04195

Name

(GenBank) hypothetical protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

fis Fischerella sp. NIES-3754

Brite

KEGG Orthology (KO) [BR:fis00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fis03016]
    FIS3754_31200
Enzymes [BR:fis01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     FIS3754_31200
Transfer RNA biogenesis [BR:fis03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    FIS3754_31200
Prokaryotic type
   tRNA splicing ligases
    FIS3754_31200

SSDB

Motif

Pfam:

RtcB DUF4514

Other DBs

NCBI-ProteinID:

BAU07194

UniProt:

A0A0S3TQ28

Position

complement(3590769..3591950)

AA seq 393 aa
MPYEQLEISTPSPVLSWANHPLGSEEIKMAKNVASLPFVFKHVALMPDVHLGKGALVGSV
IATKEAIIPAAVGVDIGCGMAAIKTPFKSEQLESKLKKIRLDIESAIPTGFNENKEVEKS
VTNWQRWRDFKDLHPGVQNLQEKAMRQMGSLGGGNHFIEVCLDTENRVWLMLHSGSRNIG
NMLAQCHISTAKELAKMAGNKLTDPDLAYFIAGTPEFQAYWHDLQWAQAYARFNRDVMMA
RFKQIIEKHLAGGKVTKPLLQVNCHHNYAEKEVHFGEEVYVTRKGAVRAQTEDYGIIPGS
MGAKSFIVKGKGCASSFCSCSHGAGRLLSRNKAKNVYTLDDLIEQTKGVECRKDTGVLDE
IPGAYKPIDQVMANQSDLVEVVATLKQVICVKG

NT seq 1182 nt +upstreamnt +downstreamnt
atgccttacgaacagttagaaatttctacaccatctccagttttatcttgggcaaatcac
cctttaggctcagaagaaattaagatggcaaaaaatgtagcatccctgccatttgtgttt
aaacacgtggcattaatgccagatgttcacttaggaaaaggtgctttagttggttctgtc
attgccactaaggaagcaattatccctgcggctgtgggtgtagatattggttgtggaatg
gctgcgatcaaaacaccatttaaaagtgagcaattagaaagtaaactcaagaaaattcgc
ttagatatagaatctgcaattcctacaggttttaacgaaaataaagaagtagaaaaatct
gtaactaactggcaaagatggcgagattttaaagacttgcatccaggggtgcaaaacttg
caagaaaaagcgatgcgacaaatgggttctctaggcggaggtaatcattttattgaagtt
tgtctggatacagaaaaccgagtttggctgatgttgcattctggttctcgcaacatcggt
aatatgcttgctcagtgccacattagcacagctaaggaattggcaaagatggcaggtaat
aaattaaccgatccggacttagcctattttatcgctggtacgccagaattccaggcgtat
tggcatgatttacagtgggcgcaagcatatgcacgtttcaaccgcgatgtaatgatggca
cgttttaaacaaattatcgaaaagcatttagcaggtgggaaagtgacgaaacctttacta
caagtaaattgccatcataattacgctgaaaaagaagtacattttggtgaggaagtgtac
gtaactcgtaaaggtgcggtgcgtgctcaaacagaagattatgggattatacctggttcg
atgggggcaaaatccttcattgtcaaaggtaaaggttgtgctagtagcttttgttcttgt
agtcatggtgctggtcgtttactatcaagaaataaggcaaaaaatgtctatactcttgat
gatttaattgaacaaacaaaaggggtagaatgtcgcaaagacacaggtgttttggatgaa
attcccggcgcttataaacctatagatcaagtaatggcaaatcaatctgatttagtggaa
gttgtagctacacttaaacaagttatttgcgtaaaaggttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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