KEGG   Candidatus Filomicrobium marinum Y: BN1229_v1_0324
Entry
BN1229_v1_0324    CDS       T03857                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase 4 subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
fiy  Candidatus Filomicrobium marinum Y
Brite
KEGG Orthology (KO) [BR:fiy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fiy03032]
    BN1229_v1_0324 (parE)
   03036 Chromosome and associated proteins [BR:fiy03036]
    BN1229_v1_0324 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fiy02048]
    BN1229_v1_0324 (parE)
Enzymes [BR:fiy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BN1229_v1_0324 (parE)
DNA replication proteins [BR:fiy03032]
 Prokaryotic type
  DNA Topoisomerases
   BN1229_v1_0324 (parE)
Chromosome and associated proteins [BR:fiy03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    BN1229_v1_0324 (parE)
Prokaryotic defense system [BR:fiy02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    BN1229_v1_0324 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: CPR15360
UniProt: A0A0D6JBE4
Position
1:complement(310427..312445)
AA seq 672 aa
MAKPQTIDLFSSSETELKEKQPRGRKSTDASDNYTAADIEVLEGLEPVRRRPGMYIGGTD
EKALHHLFAEIIDNSMDEAVAGHASYIEVNLGADGYLTVADNGRGIPVDAHPKFKSKSAL
EVIMTTLHAGGKFDGKAYQTSGGLHGVGVSVVNALSEILEVEVARGQQLYRMVFSRGKPQ
SKLEKLGAIKNRRGTRVRFKPDEQIFGKGTAFKPARLFKMARSKAYLFGGVEIRWSCDPE
LIKDDTPAQAVFHFPGGLRDYLQETINGLTLVTNELFAGRIEKPGGHGSVEWALAWIGNA
DGFMNSYCNTIPTGEGGTHEAGLRAALMKGLRAYGDRVGNKKAAQITADDVMVTAGCMLS
VFIREPEFQGQTKDKLATQEASRIVETTVRDSFDHWLVDRPQQANKLLEWVIEQAEERLK
RRRDKEVSRQSATRKLRLPGKLADCTIRSAEGTEIFIVEGDSAGGSAKSARNRETQAILP
LRGKILNVANASAAKLAQNQLLSDLIQALGVGLGKHYRDDDLRYERVIIMTDADVDGAHI
ASLLITFFFQQMPELITKGHLFLAVPPLFKLTHGAKSVYARDEDHKNALLKSEFKAGAKV
EISRFKGLGEMNSGQLKETTMDPKVRTLLRVVIDDESNEIVSEAVNALMGSKPEARFRFI
QDRAAFVTDLDV
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggccaaaccacaaacgatcgacctcttttcgagctccgagaccgaattgaaagaaaaa
cagccgcgcggccgcaaatcgacggacgcctccgataattacaccgcagctgacatcgag
gtccttgagggcctagagcccgtacgccgtcgccccggtatgtatatcggcggcacggac
gagaaggcgctgcatcacctgttcgccgagatcatcgataactcgatggacgaagcggtg
gccggtcacgccagctacatcgaggtcaatctcggcgccgacggctatcttaccgttgcg
gacaatgggcgcggcattcccgtcgacgcgcaccccaaattcaaatcgaagtcggcgctc
gaagtcatcatgacgaccttgcacgctggcggtaaattcgacggcaaggcgtatcagacc
tccggtggcctgcacggcgtcggcgtctccgtcgtgaatgcactttccgaaatcctcgag
gtcgaggtcgcacgcggccagcagctttaccggatggtattttctcgcggcaagccgcag
tcaaaactggaaaaacttggcgcgatcaaaaaccgccgcggcaccagggttcgcttcaaa
cccgacgagcaaatcttcggtaaaggcacagctttcaaacccgcgcgcctcttcaagatg
gcccgttccaaagcctatctgttcggcggggtcgaaatccgctggtcatgcgatccggaa
ctcatcaaggatgacacaccggcccaggccgtcttccacttccccggcggcctgcgcgat
tatctccaagagaccatcaacggccttacgctggttaccaacgagctgttcgcaggccgc
attgaaaaacccggcggacacggatcggtcgaatgggctctggcctggatcggcaacgct
gacggcttcatgaattcctattgtaatacgatcccaacgggtgagggtggcacacatgaa
gccggtctccgcgctgccctgatgaaaggcctgcgtgcctacggcgatcgcgtcggcaac
aagaaagccgctcaaatcaccgccgacgacgtcatggtcacggccggatgcatgctctcg
gtgttcatccgcgaacccgaattccaaggccagaccaaggataaactggcaacacaggaa
gcctctcgcatcgtcgaaacgacggttcgcgattcattcgatcattggctcgtcgatcgc
ccacaacaagctaacaagctgctcgaatgggtcatagaacaagccgaagagcgcttgaag
cgccgccgcgataaggaagtcagccgccaatccgccacacgcaaattgcgcctgcccggc
aaactggcggactgcacgatacggtccgccgaaggcacagaaattttcatcgtcgaaggc
gactcggccggcggctctgccaagagtgcgcgcaaccgcgaaacccaagcgatcctgccg
ctgcgcggcaagatcttgaacgtcgccaacgcgtccgcagctaagctggcccaaaaccag
cttctatcggatctgatacaggccctcggcgtcggcttgggcaaacactaccgggacgat
gatctgcgctacgagcgcgtgattatcatgaccgatgccgacgttgacggcgcccacatt
gcatccctgctgatcacgttcttctttcagcagatgcccgaactcatcaccaagggacac
ctgttcctggcggtgccgccgctcttcaagttgacccatggagccaagtccgtctacgca
cgcgacgaggaccacaagaatgcgcttttgaagtccgagttcaaagctggcgccaaggtt
gaaatcagccggttcaaaggtctcggcgagatgaattcgggccagctcaaagaaacgacg
atggacccgaaggtccgcacgctcctgcgcgtggtcatcgacgacgaaagcaatgaaatc
gtttctgaagcggtgaacgctttgatgggctccaagcccgaagcacggttcaggttcatc
caggatcgggcagcatttgtaacggacttggacgtttag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system