KEGG   Flammeovirga sp. MY04: MY04_2648
Entry
MY04_2648         CDS       T04442                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
flm  Flammeovirga sp. MY04
Pathway
flm01501  beta-Lactam resistance
flm01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:flm00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    MY04_2648
   01503 Cationic antimicrobial peptide (CAMP) resistance
    MY04_2648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:flm03036]
    MY04_2648
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:flm02000]
    MY04_2648
   01504 Antimicrobial resistance genes [BR:flm01504]
    MY04_2648
Chromosome and associated proteins [BR:flm03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    MY04_2648
Transporters [BR:flm02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   MY04_2648
Antimicrobial resistance genes [BR:flm01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    MY04_2648
SSDB
Motif
Pfam: HlyD_D23 Biotin_lipoyl_2 HlyD_3 CusB_dom_1 HlyD_2 Biotin_lipoyl Reprolysin_5 SOAR
Other DBs
NCBI-ProteinID: ANQ50017
Position
1:3307248..3308429
AA seq 393 aa
MTSNFFRAVLKLVTLFLITNFLMSCGGDEKPTSQLPEIEIPVTEVIVQDVPISKSFVGQV
YGTKDIPIRSRVEGYLEGIHFKEGSRVKKGQLLYTVDPQTYAAEVTMLKSKLAEAEVTLI
RAKNDLARIKPLAEKNAVSKSDLDAAQAEKDAAESMVAAAKANLRMSQIELGYTTIKSPI
SGIIGRTEAKVGEFVGRDPNPVILNTVSRIDSVNVRFYINENDYLRLARYSINNKENERR
QSENEDVNKLDLIFSDNTVYNHKGHFDFLDRNVDANTGAILIQATFPNNEGLIRPGQFAK
VRSTIEIVKDGVLVPQRAVMEFQGKYSVFVVNKEGKVAQRAIKLARHSYKDYFLVREGLK
KGEKIVLEGLQKVREGATIKYKVVQFESQHEGA
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgacatctaatttctttagagccgttttaaaactagtaacgctctttctgattacaaac
tttttgatgagttgtggaggagatgagaaacctacatctcaacttcctgaaatcgaaatt
cctgtaacagaagtgatcgttcaagatgtacccatttcaaaatcttttgttggccaagtt
tatggtacaaaagatattcctatccgttctcgagtagaaggttacttggaaggtattcac
ttcaaagaaggtagcagagtaaaaaaaggtcaactgttatatacagtcgatcctcagaca
tatgctgctgaagtaactatgttaaaaagtaaattagcagaagcggaagttactttaata
cgagctaaaaacgatttagccagaattaaacctttggcagaaaaaaatgccgtttcaaaa
tcagatcttgatgctgcccaagcagaaaaggatgctgccgaatctatggttgctgcagct
aaggcgaatttaagaatgtctcaaatcgaattgggatatacgactattaaatcgccaatt
tctggtatcatcggtagaactgaagctaaagtaggtgaattcgttggtagagaccctaac
ccagtaatcttgaatacagtttcgagaatcgattcagtaaatgtgaggttctacatcaat
gaaaatgattatttaagattagctcgttattctattaataacaaagaaaacgaaagaaga
caaagcgaaaatgaggatgtcaataagttagatttgattttctctgataacacagtatat
aatcataaaggacatttcgatttcctagatcgtaatgtagatgcgaatacaggtgccatt
ttaattcaagcgacattccctaataacgaaggactaattagacctggacaatttgccaag
gtgagatctaccattgaaattgtaaaagatggtgtgttggttcctcaaagagccgtaatg
gaattccaaggcaaatattccgtgtttgttgttaacaaagaaggaaaagttgctcaaaga
gctatcaaattagctagacactcttacaaagattacttccttgttagagagggcttgaaa
aaaggagaaaagattgttctagaaggacttcaaaaagttcgtgaaggagcaacaatcaaa
tacaaagtagttcaattcgaatcacagcacgaaggagcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system