KEGG   Finegoldia magna: FMG_1499
Entry
FMG_1499          CDS       T00661                                 
Name
(GenBank) ATP-dependent exodeoxyribonuclease alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
fma  Finegoldia magna
Pathway
fma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FMG_1499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fma03400]
    FMG_1499
Enzymes [BR:fma01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FMG_1499
DNA repair and recombination proteins [BR:fma03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FMG_1499
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 HHH_5 PIF1 T2SSE nSTAND3 Helicase_RecD SLFN-g3_helicase HHH_2 PhoH AAA_22 DEAD RsgA_GTPase NTPase_1 Herpes_Helicase UvrD-helicase AAA_5 5_3_exonuc AAA_28 HHH_3 AAA_16 ABC_tran TrwB_AAD_bind ATPase_2 AAA_24 KTI12 AAA_29 UvrD_C Rad17 SRP54 AAA_14 cobW Zeta_toxin Thymidylate_kin RNA_pol_A_CTD AAA_7 PRK AAA_18 GvpD_P-loop Sigma54_activat ResIII DNA_pol_lambd_f Ploopntkinase3 Mg_chelatase AAA
Other DBs
NCBI-ProteinID: BAG08917
UniProt: B0S3H7
Position
complement(1647585..1649816)
AA seq 743 aa
MKFTATVKNIIFENESNGFRIFSVDKDGEERIIKGNSFKIMPGDFLDIEANKVQDPKYGE
QYNIISVERSNKPSMYNIINYLQSGLIKGIGETTARRIVEEFGEDTMEILKNSPSKLLQV
KGIGKKNYKKIKESLDEKKEYAEIFLYLQSLGLSLHQANIISDFYKEDTKKIIMQNPYTL
IDDIRGIGFRTADIIAQRIDIEPDSPFRIKAAFKYFMEKEANSNGNCYVLEDDLIEGVEK
LLDIEIKNRQETLESLIVSGIIAIDDTDDENRVYLPQIEKSEMRCAMNIANILKTEIEDE
FDVEYELSKLESEHLDDLQIEAIKKSMTEKMLIITGGPGTGKTTIINNITKIFKNNDKEI
ILAAPTGRAAKRLSESCNEEAKTIHRILGYIPVEDGTIFDHDEDNPIDCDLIIIDEASMM
DIFIADSLLRALDSNTRVVFVGDCDQLPSVQAGNVLNDLIECGEITTIKLTKIFRQAQNS
NIIVNAHRINNGEFPILNEKGKDFFFIEENDPERAKQTILDLCAQRLPNFYKKDEFDDII
VLTPMKKSSCGTKELNTALQEVLNPKTPMTEEIEQRDRIFRLNDKVMQIKNDYTKEFIDD
DAMGVFNGDIGRVTYVDPIDETVDVLFDDKTASFTKKECDGLTLSYAITIHKSQGSEFPI
VVIPVTQAPFMLLTRNLLYTAITRAREIVVLVGSLKILRQMISNNKIMKRNSGLDRRIKQ
YMDFDIDDDEQEMMKEMFEDEGF
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgaaatttacagcgactgtcaaaaatataatattcgaaaatgagtccaatggttttagg
attttttccgtagataaggacggggaagagagaatcatcaagggaaatagtttcaaaatt
atgcctggagatttcttggatattgaggcaaacaaagttcaagatccaaaatacggcgag
caatacaacataatttccgttgaaagatccaataagccaagcatgtacaatatcatcaat
tatcttcaaagcggtttgattaaaggaatcggagaaactactgcgagaagaatcgtcgaa
gaatttggcgaagatacgatggagattttaaaaaattctccatccaaattattgcaagta
aaaggaattggcaagaaaaattacaagaaaatcaaagaatctctcgatgagaaaaaagaa
tacgcagagattttcttgtatttgcaatcgttggggctaagtcttcatcaagcgaatatt
atttctgatttttacaaggaagacaccaagaaaattatcatgcaaaatccatacactttg
attgacgacattaggggaattggattcaggacggcggacatcattgcgcagagaatcgac
atcgagccggattctccatttagaatcaaagctgcgttcaaatattttatggagaaggaa
gcaaattccaacggaaattgctacgtattggaagatgatttgatagaaggtgtcgaaaaa
cttctcgacattgaaatcaaaaacagacaagaaacgttggagtctttgattgtcagtgga
attatcgccattgatgatacagatgatgaaaacagagtctaccttccacaaatagaaaaa
tccgagatgagatgtgcgatgaatattgcaaatattttgaaaacagaaatcgaagatgag
tttgatgtggagtacgagctttccaagcttgaatcagaacacttggatgatttgcaaatc
gaagctatcaagaaatctatgaccgaaaaaatgttgataattacaggtggacctggtacg
ggaaagactacgattatcaacaatattacgaaaattttcaaaaataatgacaaggaaata
attctcgcggcgcctactggacgtgcggcgaaaagattgtcggaaagttgcaacgaagaa
gcgaagactattcacagaattctgggatatattccagttgaggatggaacgattttcgat
cacgacgaggacaatccaattgattgcgatttgataattatagatgaagcgagtatgatg
gatattttcatcgcggacagtttgctgagagcattggattctaatactagggttgttttt
gttggagactgcgaccagcttccgagtgtgcaagcgggaaatgtgctaaatgatttgata
gaatgtggagaaatcactacaataaaattgacgaaaattttccgtcaagcgcaaaactcc
aacataattgtgaatgcgcacaggattaacaacggagagtttcctattttgaatgaaaaa
ggcaaggattttttctttattgaagaaaatgatccagaacgcgccaagcagacgattctc
gatttgtgcgcacaacgacttcccaatttctacaaaaaagatgagtttgacgatataatt
gtgctaactccaatgaaaaaatctagttgcggaactaaagaattgaacacagctttgcaa
gaagttttgaatccaaaaactccaatgactgaagaaattgagcaacgagacaggattttc
aggctcaacgataaagttatgcaaatcaaaaatgattatacgaaagaattcatcgacgat
gatgcgatgggcgttttcaacggagatatcggaagagttacatacgtcgatccgattgat
gagacggttgatgtgttgtttgacgataaaactgcgagtttcacgaaaaaagaatgcgat
ggtttgacgctatcatatgcgattacgattcacaaatcacaaggcagtgagtttccgatt
gtagtaattcccgttacgcaggcaccatttatgttgttgacgagaaatttgctctatact
gcaatcacaagagcgagagaaatcgtcgttttggttggaagcttgaagattttacgacaa
atgatatccaacaataaaataatgaagagaaattcaggattggatagaagaatcaaacaa
tacatggattttgatatcgacgatgacgaacaggaaatgatgaaagagatgttcgaagat
gagggattttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (50)   
   Pfam (50)   
All databases (88)   

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