KEGG   Fomitiporia mediterranea: FOMMEDRAFT_155271
Entry
FOMMEDRAFT_155271 CDS       T03132                                 
Name
(RefSeq) polyubiquitin
  KO
K08770  ubiquitin C
Organism
fme  Fomitiporia mediterranea
Pathway
fme04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    FOMMEDRAFT_155271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fme04121]
    FOMMEDRAFT_155271
Ubiquitin system [BR:fme04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   FOMMEDRAFT_155271
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 TBK1_ULD Rad60-SLD_2 Dsc3_N DUF2604 Ubiquitin_5 Sde2_N_Ubi OTU1_UBXL
Other DBs
NCBI-GeneID: 18674465
NCBI-ProteinID: XP_007265753
JGI: Fomme1_155271
Position
Unknown
AA seq 321 aa
MQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKN
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLGEL
GLAHITANGANILDSAALTRG
NT seq 966 nt   +upstreamnt  +downstreamnt
atgcagatctttgttaagacgctcacgggcaagaccatcaccctcgaggtcgagtcgtcc
gatacgatcgacacggttaagaacaaaattcaggataaggaaggcattcctcctgaccaa
caacgcttgatcttcgccgggaagcagctcgaagatggccgcaccctatccgattacaac
atccagaaggagtcgacgctccatcttgtcctgcgtctccgtggtggaatgcagatcttc
gtgaagacgttgactggaaagaccatcactctcgaggttgaatcttccgacaccattgac
acggtcaaaaataagattcaggacaaggaaggtattcctcccgaccagcagcgcctcatc
ttcgccgggaagcagcttgaggatggccgtaccctttctgactacaacattcagaaggaa
tctactctccaccttgttcttcgtcttcgtggtggtatgcagatcttcgtcaagacgttg
acaggcaagaccatcaccctcgaggtcgaatcttcggatacaatcgacacggtcaaaaat
aagattcaggataaggagggcattcctcccgatcagcaacgattgatcttcgccggcaag
cagctcgaagatggacgaaccctgtcggattacaacattcagaaggagtcaacgttgcac
ttggttcttcgtctccgtggcggtatgcagatcttcgtgaagactttgactgggaagacg
atcacgcttgaggtggaatcttccgacaccatcgacacggtcaaaaataagattcaggat
aaggaaggtattcctcctgaccagcagcgtttgatcttcgctggtaagcaactcgaggat
ggtcgtactctatcagattacaacatccagaaggagtcgactcttcaccttggtgagttg
ggtcttgctcacatcactgccaacggtgctaatattcttgacagtgctgcgcttacgcgg
gggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (239)   
   KEGG ORTHOLOGY (1)   
   RefGene (234)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (255)   

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