KEGG   Fomitiporia mediterranea: FOMMEDRAFT_161628
Entry
FOMMEDRAFT_161628 CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
fme  Fomitiporia mediterranea
Pathway
fme03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FOMMEDRAFT_161628
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:fme01002]
    FOMMEDRAFT_161628
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fme03021]
    FOMMEDRAFT_161628
   03036 Chromosome and associated proteins [BR:fme03036]
    FOMMEDRAFT_161628
Peptidases and inhibitors [BR:fme01002]
 Metallo peptidases
  Family M1
   FOMMEDRAFT_161628
Transcription machinery [BR:fme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     FOMMEDRAFT_161628
   Coactivators
    SAGA/TFTC/STAGA complex
     FOMMEDRAFT_161628
Chromosome and associated proteins [BR:fme03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     FOMMEDRAFT_161628
SSDB
Motif
Pfam: Bromodomain Peptidase_M1 HEAT_2
Other DBs
NCBI-GeneID: 18675677
NCBI-ProteinID: XP_007271180
JGI: Fomme1_161628
Position
Unknown
AA seq 1807 aa
MFAKVSQYNQQNVVLEIDFSGLFFGYTELTIVPTSKDLKTIYLHSRQCTITSIQVGGYNV
QDWIYHDPLSNVVMSDITDCHRHPEVKRKMYSSLAECDEGELAIPIPRQVPIRSSGQVAG
MLNGDTGMLGPQSPAHAIPLTQQASSEFAPIQVRISYCLKNPVEGIQFILPSDAYPYRVP
HMYTTSSSPDAARCWIPCLDSLWERCIWDFKFIVPKTLEGTTDDMDVDNDDLNVTPTVVL
AHPNNANKVIYHFKQDVPTSVQHVAFAAGPFCHHQIQLGQEQRSGHAEETVNSQIRVDTF
CLPGYESSLSNMASFVRSSLNSYITDCGSYPFGSYTLLFVDELLSQRVDSASLTIVSSDL
LHGDDAIDQVYESRQVLLHGLACQWVGISIIPKTWSDLWLVNGLGLYIAGLCFKKHMGNN
EYRFRLKKDVERVLELDNGTMPPICQPGSMEPPDASTLAFINLKAPLVLHILDRRLGKSG
TSLGLSRVLPKIFLSATAGDMAQNCLSTHFFLRTCRKVSGVDLRSFVDQWIHGSGCPQFS
FLATFNRKKMAVEIQMRQECPAYAIHQNDPISNSLLKPVPFFEGQMTVRIHEADGTPYEH
VLDILSPIKRFEVPFNTKYKRVRRNTKRYLARQAAAQAAAEGDTEAAEAMGMVDMSFGLE
IWENEEEREKWKVTDWTEEEEQAMAGATYEWIRMDADFEWIARIQFEQPDYMWVSQLQRD
RDVVAQVEAVHALARQPTPIVSSTLTKTVLVTNYFFRVRCEAALALVNCASRRLDFVGLF
HLFKLFLRYCYEPEDSSQDLFSHKFVPRPNDFSDVAEYFALVNAISQVRFENGKTPPEIR
QFFIDQLRYNDNTTNAYSDAYYIASLITALACATISTAPPERGELTMSVPKNDITGEDHQ
LLQAAITEVDRYRSMDRLIPSVHNVVTIASLEFHIMLAMANLIPSDPKIFLLCTREGNAT
QVRLAGFDGLFLTKWYTPKIMTYIFAVIANDSSRAVRRQVARNMCESLALLASIGEIKAP
AKETESLLIEEDGTAPDKAKESKKSEVDLMIRALRKDREVGKSDILRTCVMPVILDPQAD
LDVRLCMLKLADLVVRGADEPLPKNTIHLPPTPVTESPPVVPMQTPSSIKIAPKVSKPQI
KIGQRKQSLATPSTPTPSTSHAPSKLRLAPSGSTMPPASVDTENIAPAAESRFKEPLPPL
LPSKAAPGSKKKDKPIPKSQSGGMSIQDVKACQAALKRLNTCKAAFLFLQPVDPIRDKAP
DYFDVIKNPMDLQTMGHKLQNGMYKNRQDLESDFRLMIRNCRTYNPQGSYAYNESVALET
FFDKVWTKINATVTSAEKAAPKFEAAAKPSIPPAPAPVEDTNVIAPEPTSSAPKLKLKLG
PSQPAANTEASKAGPLKAKHPPKPRKPKTVEKATDMPPPPYIDDGSHDLLQEVIAMEELE
KSPTKSSSLKSRKVVELDADEELLRLASPEPKVVPEHSSVVEKHHSPAAHSTHLPISSPK
PAPTPVKPKKLTERPVQPSKSVKGKEKEADMVPPAPSSQASSVAPYRPKKSRSATPMATT
STTVPINEAKCRDLLRILVGLPQSFFFREPVDPIRDGCPTYYDEIKNPMDFATISGRLKK
GHYSTMEEFGSDIELIFANCRQFNPPGTLPVINAESVEKVFRREWPKAVEKRLSFKEKRG
LMSAMTKLMNDVAWFAFWEPVDPVALQIPDYHDVIPKRDARDLRTIRSKLETDKYDSIEA
WEADMNLMVDNAIKFNGLESEVGQTAVRMRDKIREESARVRTQKKRPATGDLRENSDQGN
AKKAKLS
NT seq 5424 nt   +upstreamnt  +downstreamnt
atgttcgcaaaggtttctcaatataatcagcagaatgtcgtattggagatcgacttctct
ggattattcttcgggtataccgaattgacgatcgtacccacgagcaaggatttgaaaacg
atatatctgcactcgcgacaatgcaccataacttctatacaagttggtggatacaatgtg
caagattggatctatcatgacccgctttcgaacgttgttatgtcggatattaccgactgt
caccgacatccggaggtcaaacgaaagatgtattcatcgcttgcggagtgcgacgaagga
gagcttgctattccgattccgaggcaggtaccaataagaagttccggacaggtggcgggc
atgctgaacggcgatactgggatgctagggccacagtctccagcccatgccatccctctg
actcagcaagcctcatcagagtttgcacctattcaagttcgcatcagctactgtttgaaa
aatcccgttgaagggattcaattcattttgcctagtgatgcgtatccttatcgtgtcccg
cacatgtatacgacctcttcatcgcctgacgcagcgaggtgctggattccctgcctcgat
agtctttgggaaaggtgtatatgggatttcaagtttattgtaccaaagacactggaaggc
acaacggatgacatggacgtggataatgacgacctgaatgttactccaacagtcgttctc
gcccatccgaataatgccaataaagtgatatatcactttaaacaggatgtcccaacttcc
gttcagcacgttgctttcgctgcagggcctttctgtcaccatcagatacagcttggacaa
gaacaacggagtggccatgctgaagaaactgtcaattctcagattcgtgtagatacgttc
tgcctacctgggtacgaatcttccctgtccaatatggcgtcattcgtgcggtcaagcttg
aattcctacatcactgattgtggatcatatccctttggctcgtacacattactattcgtg
gatgagctattgtcgcagcgagttgatagtgcatccttgacgatcgtttcgtctgattta
cttcacggggacgacgccatagatcaagtctacgaatcacgtcaggttctcttgcatggc
cttgcctgtcagtgggtaggaattagcattattccgaagacttggtcggacctatggctt
gtgaatgggttgggcctctatattgcaggcctttgctttaagaagcatatgggtaacaac
gaataccggtttcgcctgaagaaggacgtagagcgagtattggaacttgataatggaact
atgcctccaatctgtcaaccaggaagtatggagcctcctgatgcatcgacacttgctttc
atcaatttgaaagcccctcttgtgctacatatcctcgatagacgccttggaaaatccgga
acatctcttggcctgtcccgcgtcttgccaaagattttcctttcggctaccgctggcgat
atggcacagaattgtttatcaacgcatttctttttgcggacatgtaggaaggtcagcggc
gttgacttgcgttcgttcgttgatcagtggatacacggcagtggatgccctcagtttagc
ttccttgctacgttcaatcggaagaagatggctgtcgagattcagatgcgccaagagtgt
ccggcgtacgcaattcatcagaacgacccgatatcgaactcgttactgaagccagttcca
ttctttgagggccagatgaccgttcggatccacgaagctgacggaacgccttatgaacac
gtgctcgacatcctttcgccgatcaagcgctttgaagtgccattcaatacaaaatacaaa
cgggtgaggcgaaataccaaacggtatcttgcacgtcaggcagcggcgcaagcggctgcg
gaaggtgatactgaggctgctgaggccatggggatggtcgacatgagctttggcctggaa
atttgggagaatgaggaggagcgcgagaaatggaaggtaacagactggacagaggaagaa
gagcaggcaatggcaggcgctacgtatgaatggatcaggatggatgcagattttgagtgg
atcgcacgaatacagtttgaacaaccggattatatgtgggtttcccagcttcaaagagac
cgagatgtagttgcacaggtggaggctgtacatgcactagctcggcagccgacccctatc
gtatctagtacattaacgaaaacggtcctggtgacgaactacttcttccgcgttaggtgt
gaagcagctttggcgcttgtcaattgcgcttctcgtaggctcgacttcgttgggttgttc
cacttattcaaactatttctgcgatactgctacgagcctgaggactctagccaagatttg
ttttcccacaaattcgttcctcgccctaacgatttttccgatgttgcggagtatttcgct
ctcgtcaatgctatttctcaagtgcgatttgagaacggcaagactccacctgaaattcga
caattttttattgaccagctccgatacaacgacaataccactaatgcttattctgatgca
tactacattgcctccctcataactgcgctggcttgtgcaaccatctcaacagctcctcct
gagcgaggagagctcaccatgtccgtaccaaagaacgatataaccggagaggatcatcaa
ttactgcaagccgctattacagaagttgaccggtatcgaagcatggaccgactcattcca
tcggtgcacaatgtagtcactatcgcttcgcttgaattccacatcatgcttgctatggca
aatctcattccgagcgatccgaaaattttcctactctgcactcgggagggtaatgcgact
caagttcgccttgccggttttgatggattgttccttacgaagtggtatacaccgaagatc
atgacttatatctttgcggtcattgcaaatgattcatcgcgagcagttcgacgacaagtt
gcccgtaatatgtgcgagagtttggccttacttgcgtcaattggcgagatcaaagctcct
gcaaaagagacagagtctcttcttattgaggaagacggcactgcgccagataaagcgaag
gagagcaagaaatcagaggtggaccttatgattcgcgctctgcgaaaagatagggaagtt
ggaaagagcgacatattgcgaacatgtgtcatgcccgttatactcgacccgcaagctgat
ctcgatgtgcgactttgtatgctcaagctcgcagatttagttgtccgaggggcagatgaa
cctctaccgaagaataccatccatctacctccgactccagttactgaatctccccctgtc
gttccgatgcagactccgagcagtatcaagattgctcctaaagtctcaaagcctcagata
aagattgggcagcggaaacagagtttggccacgccatctacgccaactccatctacgtcc
catgctccttcgaagttgcgcttggcaccgtctggttctactatgcctcccgcctctgtc
gatacggagaatatcgcaccagctgcagaatcaaggttcaaagagccgcttcccccgctt
ctaccatccaaagcagctccaggttcgaagaagaaagacaagcctatcccgaagtctcaa
tctggtggaatgagcatacaggatgttaaagcttgtcaagctgcattaaagcggcttaac
acctgtaaagccgcatttctcttcttgcagcctgtcgatcctattcgagacaaagcccct
gattacttcgatgtcattaaaaatccaatggacctacagacaatgggccacaagttgcag
aatgggatgtacaaaaatcgacaggatcttgagtcagactttcggttgatgatccggaat
tgccgtacatataacccgcaggggtcatatgcttacaatgagtctgttgctcttgagact
ttctttgataaagtctggacaaagataaatgctactgtgacgtcagcagaaaaggctgct
cctaagttcgaagctgctgcgaagccctcgatacctccagctcccgcgcctgttgaagat
acgaatgttatagccccagagcccacttcatctgcacctaagttgaaactgaagcttggt
ccaagccaaccagcggcgaacacagaggcttccaaagcgggaccgcttaaggctaagcac
cctccgaagcctcgtaaaccaaagacggttgaaaaggcgactgacatgcctccgccccca
tacattgatgacgggtctcacgatctactacaagaagtcattgcgatggaggaacttgaa
aaatcaccaaccaaatcgtcgagtctgaaatcgcgtaaagtcgtcgaattggatgcagat
gaagagcttctgcgacttgcaagccccgaaccaaaggttgtacccgagcactcgagtgtg
gtcgagaagcatcattctccagcggcacattcaacccacttgcccatatcctcaccgaaa
cctgccccgactccagtaaagccaaagaaactgacggagagacccgtgcagccttccaaa
tctgtcaagggaaaagagaaggaggcagatatggttcctcccgcaccttcttcgcaagcc
tcttcagtagctccttacaggccgaaaaaatctcgttctgcgacgcccatggcaacgacg
agtaccacggtaccgatcaacgaagccaaatgccgcgatcttttgaggattctcgtaggt
ttacctcagtcattcttcttcagggaacctgtggacccaatacgagacggctgcccaact
tattatgacgaaatcaagaatcccatggacttcgcaacgattagcggtcgcctcaaaaag
ggtcattactctactatggaagaattcggtagcgatatcgaactcatattcgcgaattgc
cgccaatttaatccaccaggcacgctccctgtgataaatgcagagtctgtcgaaaaggtg
tttaggagagaatggccgaaagctgtggagaaaaggctatctttcaaggagaagcggggt
ctcatgagcgctatgacgaagctcatgaacgatgtcgcgtggtttgccttttgggaaccc
gtcgaccccgttgcactgcagattccggactatcacgatgtcattccgaaacgtgatgcg
agggaccttcgaacaattcgtagcaagcttgagacggacaagtacgattcgattgaagcc
tgggaagcggacatgaatctgatggttgataatgcaatcaaattcaacgggctcgagagt
gaagtgggtcagactgccgttcgcatgagggataagattcgcgaagagtcagcacgagtg
cggactcagaagaagcgtcctgcgacgggtgatctacgagaaaattcagatcagggtaac
gcgaagaaagcgaagctgagctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (50)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (66)   

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