KEGG   Fomitiporia mediterranea: FOMMEDRAFT_71712
Entry
FOMMEDRAFT_71712  CDS       T03132                                 
Name
(RefSeq) APG12-domain-containing protein
  KO
K08336  ubiquitin-like protein ATG12
Organism
fme  Fomitiporia mediterranea
Pathway
fme04136  Autophagy - other
fme04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:fme00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    FOMMEDRAFT_71712
   04136 Autophagy - other
    FOMMEDRAFT_71712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fme04131]
    FOMMEDRAFT_71712
   04121 Ubiquitin system [BR:fme04121]
    FOMMEDRAFT_71712
   03029 Mitochondrial biogenesis [BR:fme03029]
    FOMMEDRAFT_71712
Membrane trafficking [BR:fme04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    FOMMEDRAFT_71712
Ubiquitin system [BR:fme04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   FOMMEDRAFT_71712
Mitochondrial biogenesis [BR:fme03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    FOMMEDRAFT_71712
SSDB
Motif
Pfam: APG12
Other DBs
NCBI-GeneID: 18679525
NCBI-ProteinID: XP_007261754
JGI: Fomme1_71712
Position
Unknown
AA seq 145 aa
MQSGLSAPTSPDPYLSPRTVVPGLHAISRVPSSSSAGSRAGGGPGGPSQDSLTALETYKA
RDTSKVVVRFKAVGNAPIMKQNFYKITASNRFQTVIQFLRKELGWKSGDALFTYINLAFS
PAPDDTVSNLFKCFQTDGHLIVNYR
NT seq 438 nt   +upstreamnt  +downstreamnt
atgcaatcaggactctcggcgcccacgtctcccgacccatatctgtcaccgcgaacagtc
gtcccagggcttcacgctatctccagagtaccatcatcctccagcgccgggtcacgagca
ggtggtggaccaggaggcccatctcaagattctctaacggcgctcgagacttacaaggct
cgtgatacgtccaaagttgtcgtgcgcttcaaagcagtcgggaatgctcccattatgaag
cagaacttctacaagattactgcgagcaatcggtttcagaccgtcatccagtttctgagg
aaggagctgggttggaaaagcggggatgctctgttcacatatattaatttggcattttca
cctgcacccgatgacaccgtgtcgaatctattcaaatgcttccaaacagatggtcatcta
atagttaactataggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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