KEGG   Fuerstiella marisgermanici: Fuma_05323
Entry
Fuma_05323        CDS       T04678                                 
Symbol
rho_2
Name
(GenBank) Transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
fmr  Fuerstiella marisgermanici
Pathway
fmr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fmr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Fuma_05323 (rho_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fmr03021]
    Fuma_05323 (rho_2)
   03019 Messenger RNA biogenesis [BR:fmr03019]
    Fuma_05323 (rho_2)
Transcription machinery [BR:fmr03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Fuma_05323 (rho_2)
Messenger RNA biogenesis [BR:fmr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Fuma_05323 (rho_2)
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind AAA_25 AAA Spore_III_AA AAA_22
Other DBs
NCBI-ProteinID: APZ95664
UniProt: A0A1P8WNM2
Position
7092968..7094881
AA seq 637 aa
MPSSSSSAEETKPKARRKAKASPKKKATRRKKQDDAPELFSEDDFGDGVDSSAREAKPKK
KAARKKAPAKRTKKRAEPEPEEFVGSSNADTLVDDTAAVMEEARQARFERDDEPDLSDIG
NYFSAGGDSDEAPASASSDDNAEGKTGEKESGSGEDGDADRPRRRRRRRRRGRSGGDSTE
GTIDRSVASSDRGGAAGGSNSGGGRGRSRGRQSDRGGRQTSDRGGRQSDRGGRSQSDRGG
RGRGGGGGRGGGPNPRRGRSVLPAGEPIEGTFEGVLEMHPKGYGFLRDPKKNYAAEDANP
FVSSSVVEKYGLREGVLVKGEVGPGSRNQGPRLQEVELIDAFTPEEYAEIKNFDDLTPIN
PHEQIKLEVGPTPVTMRVMDLLCPIGKGQRALLVAPPRTGKTMLLQDIANSVSINHPEIH
LMVLLIDERPEEVTEMSRSVKGEVIASSLDNDVESHVRIAQLIIERGKRLAEEGQDVFIL
LDSITRLARAFNKWVNPSGRTGRGGLDIRALDVPKKLFGTARLFDEGGSLTVCGTALIDT
NNGMDEAIFQEFKGTGNMEMMLSRDLADRRIWPSIDITRSGTRREEKILDPTTLEGVTML
RRSLISLTPVDAMEQLTKTLLKFDTNTEFLSRIKAVL
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgccatcaagcagctccagtgctgaggaaacaaagccgaaagcacgtcgcaaagccaaa
gcttctcccaagaaaaaggccactcgccggaagaagcaggacgacgcaccggaattgttc
tctgaggatgacttcggagacggtgtggattcgtccgcacgtgaagcgaagccaaaaaag
aaagctgctcgcaaaaaggcaccggccaaacgcactaagaaacgcgcggagccggagccg
gaagagtttgtgggtagcagcaatgcagacacgcttgtggacgatacagcggccgtcatg
gaagaagctcgacaggcacggtttgagcgtgatgacgaacccgatttgtcggacatcgga
aattatttcagcgcgggcggcgacagtgatgaagctccagcgtctgcctcatctgacgac
aacgcggaaggcaaaacgggcgaaaaagagagcgggagcggtgaagacggcgatgcagat
cgcccacgccgccgccgtcgtcgccgccgtcgcggtcgaagtggtggggacagtactgaa
ggcaccatcgatcgcagtgtagccagcagcgatcgaggcggggccgctggcggatcaaac
agcggtggtggccgaggacgcagtcgcggacgccagtcggatcgtggtggccgccaaacc
tcagatcgtggcggacggcaatctgaccgcggtggtcggtcgcaatcagaccgtggcgga
cgaggtcgtggtggtggcggcggccgtggtggcggcccgaatccgcgacgcggacgttct
gtactgcctgccggtgagccaattgaaggcacattcgaaggcgtgctggagatgcatccg
aagggatatggcttcctgcgtgaccctaagaaaaattacgcggctgaagatgccaaccca
ttcgtttccagttccgttgtagaaaaatacggactgcgtgaaggagtgctggtgaagggc
gaagtcggcccgggaagtcgcaatcaggggcctcgactgcaggaagtggagttgatcgat
gcgttcactccggaagagtacgccgagattaagaacttcgacgatctgacgccgatcaat
ccgcacgaacagatcaagctggaagtcggcccaacgccggtcaccatgcgagtgatggac
ttgctgtgtccgattggcaaggggcagcgagctttgctggtcgctcctccgcgaaccggc
aagaccatgttgctgcaggacattgcgaattcggtcagcatcaaccatcccgaaattcac
ctgatggttttgctgatcgacgagcgtccggaagaagtgaccgaaatgagtcgcagcgtg
aagggggaagtcattgcgtcttcgctcgacaacgacgtggaaagccacgtgcgcatcgct
caattgatcatcgaacgcggcaagcgactggccgaagaaggccaggacgtgttcattctg
ctggacagcatcactcgccttgcgagagccttcaacaaatgggtgaacccgtcgggccga
accggtcgcggcggtctggatattcgagctctggacgtgcccaaaaagctgttcgggaca
gctcgcctgttcgatgaaggcggttccctgaccgtctgcggcacggcgttgattgatacg
aacaacggcatggacgaagccattttccaggaattcaaaggaactggaaacatggaaatg
atgttgagccgagatctggcagatcgacgcatctggccttcgatcgacatcactcgttca
ggcacgcgtcgcgaagaaaaaatcctcgacccaacaacactggaaggtgtgacaatgctg
cgacgcagcctgatcagcctcacccctgttgatgcgatggagcagctgacgaagactctg
cttaagttcgacacgaacactgagttcctgtcgcgaatcaaggcagtgctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (39)   

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