KEGG   Fusobacterium animalis 7_1: FSDG_02141
Entry
FSDG_02141        CDS       T03612                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
fne  Fusobacterium animalis 7_1
Pathway
fne03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:fne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FSDG_02141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fne03021]
    FSDG_02141
   03400 DNA repair and recombination proteins [BR:fne03400]
    FSDG_02141
Enzymes [BR:fne01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FSDG_02141
Transcription machinery [BR:fne03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FSDG_02141
DNA repair and recombination proteins [BR:fne03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FSDG_02141
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: EEO43582
UniProt: A0A140PWN2
Position
complement(2424215..2427769)
AA seq 1184 aa
MQKLIERLDFGKIKSRGKMPHFLEFQLNSYEDFLQTNMSPNKREEKGFELAFREVFPIES
SNGDVRLEYIGYELHEAEAPLNDELECKKRGKTYSNSLKVRLRLINKKMGNEIQESLVYF
GEVPKMTERATFIINGAERVVVSQLHRSPGVSFSKEVNTQTGKDLFSGKIIPYKGTWLEF
ETDKNDFLSVKIDRKKKVLATIFLKAVDFFKDNNEIRDYFLETKELNLKALYKKYSKEPE
ELLNILKQELEGSIVKEDILDEETGEFIAETEAFINEELINNLIENKVESISYWHVGPES
KLIANTLMNDTTLTEDEAVVEVFKKLRPGDQVTVDSARSLIRQMFFNPQRYDLEPVGRYK
MNKRLKLDVPEEQISLTKEDVLGTIRYVIDLNNGDQNVHTDDIDNLSNRRIRGVGELLLM
QIKTGLAKMNKMVREKMTTQDIETVTPQSLLNTRPLNALIQDFFGSGQLSQFMDQSNPLA
ELTHKRRISALGPGGLSRERAGFEVRDVHDSHYGRICPIETPEGPNIGLIGSLATYAKIN
KYGFIETPYVKVENGVAIVDDVHYLAADEEDGLFIAQADTKLDKNNKLQGLVVCRYGHEI
VEIEPERVNYMDVSPKQVVSVSAGLIPFLEHDDANRALMGSNMQRQAVPLLRSEAPFIGT
GLERKVAVDSGAVVTTKVSGKVTYVDGKKIIIEDADKKEHTYRLLNYERSNQSMCLHQTP
LVDLGDKVKAGDIIADGPATRLGDLALGRNILMGFMPWEGYNYEDAILISDRLRKDDVFT
SIHIEEYEIDARTTKLGDEEITREIPNVSESALRNLDENGIIMIGSEVGPGDILVGKTAP
KGETEPPAEEKLLRAIFGEKARDVRDTSLTMPHGSKGVVVDVLELSRENGDELKAGVNKS
IRVLVAEKRKITVGDKMSGRHGNKGVVSRVLPAEDMPFLADGTHLDVVLNPLGVPSRMNI
GQVLEVHLGMAMRTLNGGTYISTPVFDGATEEQIKDYLEKQGFPRTGKVTLYDGRTGEKF
DNEVTVGIMYMLKLHHLVEDKMHARAIGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAY
GASNILQEMLTVKSDDITGRTKTYEAIIKGEAMPESDLPESFKVLLKEFQALALDIELCD
EEDNVINVDEEVGIEETPTEYSPQYEMEMTGLHEIDEDAEDFEE
NT seq 3555 nt   +upstreamnt  +downstreamnt
gtgcaaaaactcattgaaagacttgattttggaaaaataaaatctagaggtaagatgcct
cattttcttgaattccaattaaattcttatgaagattttttacaaactaatatgtcacca
aataagagggaagaaaagggatttgaattagcattcagagaggtattccctatagaatct
tcaaatggagatgtaaggctagaatatataggatatgaattacatgaagcggaagcacca
ttaaatgatgagcttgaatgtaagaagagaggaaaaacatattctaattcattaaaggtt
agattaagacttataaacaaaaaaatggggaacgaaatccaagaatctttggtttacttt
ggagaagttcctaaaatgacagaaagagcaacatttataataaatggagctgaaagagtt
gttgtatcacaattgcatagatcaccaggagtatcttttagcaaagaagttaatactcaa
acaggtaaagatttattttctggaaaaataattccatacaaaggaacttggctagagttt
gaaactgataaaaatgactttttgagtgtaaaaatagatagaaagaaaaaggttttagca
actatatttttaaaagcagtagatttttttaaagataacaatgaaattagagattatttc
ttagaaactaaggaattaaatttaaaagctctttataagaaatattcaaaagaaccagaa
gaattattaaatattttaaaacaagaattagaaggttcaatagtcaaagaagatatactt
gatgaagaaacaggagaatttatagctgaaacagaggcttttataaatgaagaattaata
aataacttgatagaaaataaggtagaaagtatttcttattggcatgttggtcctgaaagt
aaattaattgcaaatactttgatgaatgatacaactttaacagaagatgaagctgtggta
gaagtatttaaaaagttgagaccaggggatcaagtaactgttgattctgctagaagtctg
ataagacaaatgttctttaatccacaaagatacgatttagaacctgttggaagatataag
atgaacaaaagattaaaacttgatgttccagaagaacagatttcattaacaaaagaagat
gtattaggaactattagatatgttatagatcttaataatggcgatcaaaatgttcatact
gatgatatagataacctatcaaatagacgtattagaggtgtaggagaattacttcttatg
caaatcaaaacagggcttgctaagatgaataaaatggttagagaaaaaatgactactcaa
gatatagaaacagtaactcctcagtcattgttgaatactagaccattaaatgctttaatt
caagatttctttggttcagggcaattatcacaatttatggaccaatcgaatccacttgct
gaattgacacataagagaagaatatcagccttaggacctggtggtctttcaagagaaaga
gcagggtttgaagtaagagacgttcacgattctcactatggaagaatatgtccaatagaa
acaccagaaggaccaaacattggacttataggttcacttgctacttatgctaagattaat
aaatatggttttattgaaacaccttatgtaaaagtagaaaatggagttgcaatagttgac
gatgttcattatcttgctgctgatgaagaagatggattattcatagctcaagctgatacc
aagttagataaaaataataaattacaaggtttagtagtttgtagatatggacatgaaatt
gtagaaatagaaccagaaagagtaaattatatggatgtttcccctaaacaagttgtgtct
gtatcagcaggacttataccattcttagaacatgacgatgccaatagagcattgatggga
tcaaacatgcaaagacaagctgtgcctttattgagatcagaagcaccttttataggaaca
ggacttgaaagaaaggttgcagtagactcaggtgcagtagtaactacaaaagtatcagga
aaagtaacttatgtagatggtaaaaagataataattgaagatgcagataaaaaagaacac
acatatagacttttgaactatgaaagatctaaccaatcaatgtgtttgcaccaaacacct
ttggtagacttaggagataaggtaaaagcaggagatataattgcagacggacctgctaca
agattaggagatttagcattaggaagaaatattcttatgggatttatgccttgggaagga
tataattatgaagatgctattttaatctctgatagacttagaaaagatgatgtatttaca
tcaatacatattgaagaatatgaaatagatgcaagaacaacaaaattaggagatgaggaa
atcacaagagaaatccctaatgtgtctgaaagtgctttaagaaatctagatgaaaatgga
ataattatgataggttcagaagtaggaccaggagatatattagttggtaagacagcacct
aagggagaaacagagccacctgctgaggaaaaacttttaagagctatatttggagaaaaa
gcaagagatgtaagagatacatcacttactatgcctcatggttctaagggagttgtagtt
gatgttcttgagctttcaagagaaaatggagatgagttaaaagcaggagtaaataaatct
ataagggttctagtagctgaaaagcgtaagataactgttggagataagatgtcaggaaga
catggaaacaaaggggttgtttcaagggtattaccagcagaagatatgcctttcttagca
gatggaacacacttagatgttgtattaaacccacttggagtgccatctcgtatgaatata
ggacaagttcttgaagtacacttaggtatggcaatgagaactttaaatggtggaacttat
atatcaacaccagtatttgatggtgcaacagaagaacaaataaaagattacttagaaaaa
caaggatttccaagaacaggaaaagtaactttatatgatggaagaacaggagaaaagttt
gataatgaagttacagttggaataatgtatatgttaaaattacaccaccttgttgaagat
aaaatgcatgccagagcaataggaccttattcattagtaactcaacaaccacttggaggt
aaggcacaatttggtggtcaaagacttggagaaatggaagtttgggcattggaagcatat
ggagcttctaatatacttcaagaaatgttaactgtaaaatcagatgatattactggaaga
actaaaacttatgaagctataatcaaaggtgaagctatgccagagtctgatttgccagaa
tcttttaaagttcttttaaaagaattccaagcattagcacttgatatagagttatgtgat
gaagaagacaatgttataaatgttgatgaagaagtaggaattgaagaaactccaacagaa
tactcaccacaatatgaaatggaaatgactgggcttcatgaaatagatgaagatgcagaa
gattttgaagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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