KEGG   Fusobacterium nucleatum subsp. nucleatum ATCC 25586: FN1393
Entry
FN1393            CDS       T00077                                 
Name
(GenBank) Signal recognition particle, subunit FFH/SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fnu  Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Pathway
fnu02024  Quorum sensing
fnu03060  Protein export
fnu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FN1393
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FN1393
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FN1393
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fnu02044]
    FN1393
Enzymes [BR:fnu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FN1393
Secretion system [BR:fnu02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FN1393
  Eukaryotic Sec-SRP protein
   FN1393
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin DnaB_C ATPase AAA_17 KAP_NTPase ABC_tran AAA_31 AAA_33 APS_kinase 6PF2K AAA_16 TsaE ParA DO-GTPase1 AAA_18 ATP_bind_1 ArsA_ATPase nSTAND3 Thymidylate_kin KTI12 AAA_14 AAA_25 AAA_30 NACHT MobB AAA_24 CPT PRK MMR_HSR1 VapE-like_dom ResIII cobW YqeC NTPase_1 AAA
Other DBs
NCBI-ProteinID: AAL95586
UniProt: Q8RDV7
Position
complement(2049600..2050934)
AA seq 444 aa
MLENLGNRFQDIFKKIRGHGKLSETNIKDALREVKMSLLEADVNYKVVKDFTNRISEKAI
GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL
AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKE
INATYMIVDTAGRLHVDETLMDELKELKKAIKPQEILLVVDAMIGQDAVNLAESFNNALS
VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV
SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKIDD
LAPAEKEMKKVEAIIQSMTKEERKKPDILKASRKIRIAKGSGTDVSDVNKLLKQFDQMKS
MMKMFSSGKMPNIGAMGKGRRFPF
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgttagagaatttaggaaatagatttcaagatatttttaagaaaataagagggcatggg
aaacttagtgaaactaatataaaagatgctcttagagaagtaaaaatgtctcttttagaa
gcagatgttaactataaggtagttaaagattttactaatagaatcagtgaaaaagcaata
ggaacagaagttattagaggagtaaatccagcacaacaatttataaagttagtaaatgat
gaacttgttgagttgttaggaggaactagctcaaaattaacgaagggacttagaaatccg
acaataataatgttggcagggttacaaggtgcaggaaaaacaacttttgctgcaaaactt
gctaaatttttaaaaaagcaaaatgaaaagttattattggttggagtggatgtgtataga
cctgctgctataaaacaattacaagttttagggcaacaaataggtgtagatgtttactca
gaagaagataataaagatgttgttggaattgcaacaagagcaatagagaaagcaaaagaa
attaatgcaacttatatgatagttgatacagctggtaggctacatgtagacgaaactctt
atggatgagttaaaagaacttaaaaaagcaattaagccacaagaaattttacttgttgta
gatgctatgatcggacaagatgcagttaatttagcagaatcctttaataatgctttgagt
gttgatggagttattctaactaagttagatggagatactcgtggaggggcagctttatct
ataaaagctgttgtaggaaaaccaataaaatttattggagttggagaaaaacttaatgat
attgagattttccatccagatagattggtatcaagaatattaggaatgggagatgttgtt
tcccttgttgaaaaggcacaagaagtaatagatgaaaatgaagctaaatctttagaggaa
aaaataaaatctcaaaaatttgatttgaatgacttcttaaaacaattacaaacaataaaa
agattaggttcacttggaggaatcttaaaattaataccaggtatgccaaagattgatgac
ttagctccagctgaaaaagaaatgaaaaaagttgaagcaataattcaatctatgacaaaa
gaagaaagaaagaaacctgatattttaaaagcaagtagaaaaataagaattgcaaaaggt
agtggaacagatgtatcagatgtaaataaactacttaaacaatttgatcaaatgaaatct
atgatgaaaatgtttagctctggtaagatgcctaatataggtgctatgggtaaaggcaga
agattcccattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (40)   
   Pfam (40)   
All databases (76)   

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