KEGG   Formosa sp. Hel1_33_131: FORMB_10330
Entry
FORMB_10330       CDS       T04465                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
for  Formosa sp. Hel1_33_131
Pathway
for03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:for00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    FORMB_10330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:for03400]
    FORMB_10330
DNA repair and recombination proteins [BR:for03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     FORMB_10330
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II ATPase_2 AAA_14 CLASP_N AAA_29 AAA_23
Other DBs
NCBI-ProteinID: AOR28081
UniProt: A0A1D7XXM9
Position
complement(1114883..1117492)
AA seq 869 aa
MANKTKKVTPLMKQYNAIKVKYPDALLLFRVGDFYETFGSDAVKASKILDIILTKRGAGS
ESETELAGFPHHSLNTYLPKLVKAGERVAICDQLEDPKLTKSIVKRGVTELVTPGVALND
EVLSSKTNNFLAAVYFGKTIGVAFLDVSTGEFLTAQGSAEYIGKLLQNFNPSEVLIEKQK
RSIFNDTFGANFHTFYLEDWVFQDDYANETLCKHFQTKTLKGFGIEALAQGVVASGAIMH
YLGETQHHKLQHITAIERILEGDYVWMDKFTIRNLELYHSTNANAVTLIDVIDHTISPMG
GRLLKRWLALPLKSQEKIKARHEVVQYFLDNEVALQKTQNYIKQVGDLERLISKVATAKV
NPREVVHLKNSLEAIVPIKALASNCENEDLKRIGEQIQSCELLREKIKETLNEDAPVNIL
KGNSIASSASEELESLRAIAFSGKDYLNKMLERESASTGITSLKIASNNVFGYYIEVRNS
HKDKVPETWIRKQTLVNAERYITEELKEYESKILGAEDRILVIEQTLFSELVLWMHSYIL
QVQQNAQLIAQLDCLGSFAHLAQQNNYVYPEIDASFDLDIKQGRHPVIEKQLPLGESYVA
NDVFLDRDTQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPAKSARIGLIDKLFTRV
GASDNISMGESTFMVEMNETASILNNVSERSLVLLDEIGRGTSTYDGISIAWAISEYLHE
HPSHAKTLFATHYHELNEMTETFDRIKNYNVSVKELKDNVLFLRTLVKGGSHHSFGIHVA
KMAGMPPQVLHRAQQILKQLEKSHSSDELTAKVKDLDSEMQLSFFNLDDPMLEALKSDIE
AIDIDTLTPVEALMKLNEIKRMLTKKKRA
NT seq 2610 nt   +upstreamnt  +downstreamnt
ttggcaaataaaacgaagaaagtcactcctttaatgaaacaatacaatgccatcaaggtc
aagtaccctgatgcgttgctattatttcgggtgggcgacttttatgaaacttttggaagt
gatgccgtcaaggcgtccaaaatattagatattattttaaccaaacgcggcgcaggcagc
gaaagtgaaaccgaattggcgggatttccgcaccattcgctcaatacctatttgccaaaa
ttggtcaaagcaggggagcgggtcgcgatttgtgaccaattagaagatccaaaactcacc
aaatcgattgtgaaacgtggggttacggaactcgtcacgccaggtgtggcgttgaatgat
gaggttttaagttctaaaactaataattttttagcggcggtgtattttggaaaaacaatc
ggcgtggcatttttagatgtttctacgggagaatttctcacagcacaaggttcggctgaa
tatataggtaaactccttcaaaattttaacccgagtgaagtcctcatagaaaaacaaaaa
cgaagtatttttaatgacacttttggtgctaatttccacaccttctatttagaagattgg
gtgtttcaggatgattatgcgaacgaaacgctttgtaagcattttcagaccaaaaccctt
aaaggctttggaattgaagccttggcgcaaggagtggtggcttctggcgcgatcatgcat
tatttgggggaaactcagcaccacaagctgcaacacattaccgccattgagcgtatttta
gaaggtgattatgtgtggatggataagtttaccatccgaaatttagagctttaccattcg
actaatgccaatgccgtaaccttaatagatgtgatcgatcacacgatttcaccgatgggt
ggacgtttgttaaaacgttggttggcattgcccttaaaatcacaagaaaaaataaaagcg
cgtcacgaagtggtgcagtattttttggacaatgaagtagcgcttcagaaaacacaaaac
tatatcaaacaagtgggcgatttggagcgcctgatctcaaaagtagccaccgccaaagtg
aatccacgtgaagtggtgcacttaaaaaactctttggaagccattgtgcccatcaaagcc
ttggcatctaactgtgaaaatgaagatttaaaacgcattggcgagcagattcaaagttgt
gagttgttgcgagaaaaaataaaagaaacgcttaatgaagatgcgcctgtaaatattctg
aaaggaaatagcatcgcctcttctgcttctgaagaattggaaagtttgcgtgcgattgca
ttttcagggaaagattatttaaataaaatgttggaacgtgagagtgcgtcaactgggatt
acatcgctcaaaatcgcctccaataatgtatttggctattatattgaagttcgaaattca
cacaaagacaaggtgccagaaacgtggattcgaaaacaaacactggtcaatgcggaacgt
tatattacggaagaactcaaagagtatgaaagtaaaatattaggcgctgaagaccgtatt
ttagtcatcgaacaaacgctgttttctgagctggttctttggatgcattcctacatttta
caggtacagcaaaatgcacaactgattgcacaattggattgcttggggtcttttgcgcat
ttggcacaacaaaataattatgtgtatccagaaatagatgcctcttttgatttggatatc
aaacaaggacgtcatccggtgattgaaaagcagttgccgttgggggaatcctatgtggcg
aatgatgtgtttttagaccgagatacccagcaaatcattatgattacagggcctaatatg
tctggtaagtcagctattttacgccaaacggctttgattgtactcctggctcaaattggg
agttttgtgcccgccaaaagtgcgcgtatcggattgatcgacaagctttttacaagggta
ggggcgagtgataatatttcgatgggcgaatcgacctttatggtggagatgaatgaaacc
gcttccatcttaaacaatgtgtcggaacgtagtttggtgctgttggatgaaattggtcgg
gggacgagtacctacgacgggatttcaattgcctgggcgattagcgaatacttgcacgaa
catccctcacatgccaaaaccttatttgcaacccactaccatgagttgaatgaaatgacg
gaaacctttgaccgcattaaaaattacaatgtgtctgtcaaagaactgaaagacaatgtc
ttgtttttaagaactctggtaaagggtggtagtcaccacagttttgggattcatgtggca
aaaatggcagggatgccaccacaggtcttacaccgggcgcaacaaatcctgaagcagctg
gagaaatcacattcgagcgatgagctgacggccaaagtcaaagacttggacagtgagatg
caactgagcttttttaatttggatgatcccatgctagaggctttaaaatctgatatagag
gcgattgatattgatacgttgacacccgttgaggccttgatgaaattgaatgaaatcaag
cggatgttgaccaaaaagaaaagagcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (106)   
   KEGG ORTHOLOGY (1)   
   RefGene (103)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (121)   

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