KEGG   Flavobacterium psychrophilum JIP02/86: FP0198
Entry
FP0198            CDS       T00548                                 
Symbol
rnhA
Name
(GenBank) Ribonuclease HI
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
fps  Flavobacterium psychrophilum JIP02/86
Pathway
fps03030  DNA replication
Brite
KEGG Orthology (KO) [BR:fps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FP0198 (rnhA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fps03032]
    FP0198 (rnhA)
Enzymes [BR:fps01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     FP0198 (rnhA)
DNA replication proteins [BR:fps03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    FP0198 (rnhA)
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     FP0198 (rnhA)
   Elongation factors (archaeal)
     FP0198 (rnhA)
SSDB
Motif
Pfam: RNase_H RVT_3
Other DBs
NCBI-ProteinID: CAL42314
UniProt: A6GW41
Position
complement(252870..253349)
AA seq 159 aa
MNYQVHIYTDGAAKGNPGPGGYGVVMELVGTAFKKEFYEGFRHTTNNRMELLAVIVGLEK
LKNPNMKVLVVSDSKYVVDSVEKKWVLGWEKKGFKDRKNSDLWKRLLIIYRKHQVDFKWI
KGHNSHPQNERCDQLAVFASNQKTLSVDAFYEKEEAKLL
NT seq 480 nt   +upstreamnt  +downstreamnt
ttgaattaccaagtacacatatataccgatggcgctgccaaaggaaacccaggcccagga
ggctatggcgttgtaatggaattagttggcactgctttcaaaaaagagttttatgagggt
tttagacacaccacaaataaccgtatggaattgttggcagtaattgttggtttagaaaaa
cttaaaaacccaaacatgaaggttttagtagtttcggattctaaatacgtggtagattct
gtcgagaaaaaatgggttttaggctgggaaaaaaaaggctttaaagaccgaaaaaattcc
gatttatggaaacgcctactcattatttacagaaaacaccaagtcgattttaaatggata
aaagggcacaacagccatccgcaaaacgaaagatgcgatcaattagccgtttttgcatca
aaccaaaaaacactttcggttgatgctttttacgagaaagaagaagcaaaactattataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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