KEGG   Fusarium pseudograminearum: FPSE_11603
Entry
FPSE_11603        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03013  Nucleocytoplasmic transport
fpu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FPSE_11603
  09122 Translation
   03013 Nucleocytoplasmic transport
    FPSE_11603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_11603
   03041 Spliceosome [BR:fpu03041]
    FPSE_11603
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     FPSE_11603
Spliceosome [BR:fpu03041]
 Complex C
  Other components
   EJC/TREX
    FPSE_11603
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FPSE_11603
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Nup160 Ras
Other DBs
NCBI-GeneID: 20370220
NCBI-ProteinID: XP_009262995
UniProt: K3V515
Position
1:4175309..4176555
AA seq 336 aa
MAPVLRARQSLSKDKFSSYFGNLRSQPYNDANNSRGSNPHSLRCIAWNPLGTLVATGSSE
KTLRVWNPEKPHVKFSTELKGHSASIEKVAFNPTKDAELCSVSSDGVVKFWDVRTKACFN
EVKGLGDAFTLVWAPDGNSLLVGNKADTIYVLSPTQSTPISTHQQSVQTNQIAFCWSGEK
IFVTTAEGRIRVLSYPGFEPVLQSNHGDENSEYELNGHTSSCLTADLQPTGRYLATGGSD
SVIALWDTTDWVCQRTITRMVGPVKSLSFTFDGSFVVGGSDEGSGLEISHVETGEHVHTF
KTAGACPVVAWAPTRYCLAYSDLGILRIVGVDVDRK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcgcctgtcctccgagcaaggcagagtctgtccaaggacaagttctccagctacttc
gggaacctgaggagtcaaccctacaacgatgccaataattcgcggggttcaaatcctcac
agcctacgctgcattgcgtggaatcccctcggaaccctggtagcaacaggctcatcagag
aagactctacgagtgtggaaccccgagaaacctcatgtgaagttctcgacggagctcaag
ggtcactcagcatctattgaaaaggtagctttcaatccaaccaaggatgcagagctctgc
agtgtgagcagtgacggtgtggtcaaattttgggacgtgcggacgaaagcctgcttcaac
gaagtcaaaggacttggagacgccttcactctcgtgtgggcgccagacggtaactcgctt
ctcgtcgggaacaaggcagacactatctacgttctatcaccgactcaatccacgcccatc
agcactcatcaacagtcggtgcagaccaaccagatcgcattctgttggagcggcgagaag
atattcgtgaccacggcagaaggccgcattcgggttctgtcgtatccgggttttgagcct
gtgcttcagagcaatcacggtgatgaaaatagcgagtatgagcttaacgggcatacctcg
tcatgcctgaccgcggatctacagcctactggacgatatctggcgacgggtggctcagac
tcggtcattgcattgtgggataccacggactgggtatgccagaggacgattaccaggatg
gttggccctgtcaagagtctcagcttcacatttgacggtagttttgttgtgggtggcagt
gatgaaggatctgggctggagatatcacatgttgaaacaggagagcatgtacacacattc
aagacggctggtgcttgtcccgtagtcgcctgggctccaacgcggtattgccttgcgtac
agcgatcttgggatcttgaggattgtgggtgttgacgttgacagaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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