KEGG   Fibrobacter succinogenes: FSU_2682
Entry
FSU_2682          CDS       T02105                                 
Name
(GenBank) putative helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
fsc  Fibrobacter succinogenes
Pathway
fsc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fsc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FSU_2682
  09124 Replication and repair
   03420 Nucleotide excision repair
    FSU_2682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fsc03021]
    FSU_2682
   03400 DNA repair and recombination proteins [BR:fsc03400]
    FSU_2682
Enzymes [BR:fsc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FSU_2682
Transcription machinery [BR:fsc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FSU_2682
DNA repair and recombination proteins [BR:fsc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FSU_2682
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD Tfb5 SNF2-rel_dom DUF6513
Other DBs
NCBI-ProteinID: ADL26012
UniProt: C9RK00
Position
complement(3100381..3102156)
AA seq 591 aa
MNPNGAIIVQSNLEIMVEVDNPNYTTARDAIAPFTELVKSPEHLHTYKISHLSLWNAAAT
GLRAPEVLERLESQSRYPIPPTVVTEIEDYMARYGLLRLKKEDDRLLMESDDKLMFLEIC
KLKDVEPFIIEHIDDTHVVVDPERRGHLKMVLTNAGFPVEDLAGYTVGDPLPIQLRETTV
SGKPFKLRDYQKDAAQVFYASGSEKGGSGVIVLPCGSGKTVIGLATMALVQTKTLILTPN
ISSSRQWIREICDKTNLTLDQVKEYSGEVKEIGPVTVATYQILTQRKRAKKGDENKEGKE
PEMTEEEVKKELANFPLFSQEKWGLMIYDEVHLLPAPVFRLSTEMQATRRLGLTATLVRE
DHKETEVFSLIGPKKFDIPWRILEAQGWIATADCNEIRIPMDPELKMKYALAPVRDKITL
ASTNPEKTDIVERLLKYFSKPDDRVLIIGQYIDQLEALSEDLQIPLITGKTPNKEREKLY
GAFRSGAQKNLMVSKVGNFAIDLPDANVLIQISGTFGSRQEEAQRLGRVLRPKSDGGAAH
FYSIVTQDSKEQEFAMNRQLFLTEQGYAYKIIKRGDWDILMRTPEELAARA
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgaatccgaatggcgcaataattgtacaaagtaacctcgaaattatggtcgaggtcgat
aatcctaattacactaccgcacgtgatgcaatcgctccttttacagagcttgtcaaaagc
ccagagcacctgcacacttacaagatttctcatttgagcttgtggaacgctgccgcaaca
ggcctccgcgctcccgaagttctcgaaagactcgagagccagagccgctaccccattccg
ccgacggtcgtcacggaaatcgaagactacatggctcgttacggtttacttcgtttgaaa
aaagaagacgaccgcttgttgatggaatctgatgataaattaatgttccttgaaatttgc
aagctcaaggacgttgaaccttttattatcgagcacattgacgatacgcacgtcgtcgtt
gacccggaacgtcgtggtcatttgaaaatggtcctcaccaacgctggtttcccggtcgaa
gacttggccggttataccgttggcgacccgctccccatccagctccgcgaaacaaccgtt
tccggcaagccgttcaagctccgcgattaccagaaggatgccgcacaggtattctacgcc
agcggtagcgaaaagggcggttccggcgtgattgttctcccctgcggttccggtaagacg
gtgattggccttgccacgatggctttggtacaaactaagactttgattttaacgccgaac
atttcgtcttctcgtcagtggatccgcgaaatctgcgacaagacgaaccttacgcttgac
caggtcaaggaatactccggcgaagtgaaggaaatcggtccggtgaccgttgccacgtac
cagattttgacgcagcgcaagcgcgccaagaagggcgacgaaaacaaggaaggcaaggaa
ccagaaatgaccgaagaagaggtcaagaaagaacttgcaaacttcccgcttttcagccag
gaaaagtggggcctcatgatttacgacgaagtccacttgctcccggctccggtgttccgc
ttgagtaccgaaatgcaggccactcgccgcctgggccttacggcaacgctcgtccgtgaa
gaccacaaggaaaccgaagtgttcagtttgatcggaccgaaaaagttcgacattccttgg
cgcatcttggaagcccagggctggattgccaccgccgactgtaacgaaatccgcatcccg
atggatccggaactcaagatgaagtacgcccttgctccggtgcgcgacaagattacactc
gcaagcacgaaccccgaaaagacggacatcgtcgaacgcttactcaagtacttcagcaag
cccgatgaccgcgtgcttatcatcggccagtacattgaccagcttgaagcactttccgaa
gacttgcagattccgctgattaccggcaagacgccgaacaaggaacgcgaaaagctttac
ggagccttccgttcgggcgcgcagaagaacctcatggtctcgaaggtcggtaacttcgct
atcgacttgccggacgccaacgtgcttatccagatttcgggtacgttcggtagccgccag
gaagaagcccagcgcctcggccgcgtattgcgtccgaagagcgacggcggcgccgcccac
ttctacagcatcgtgacgcaggactccaaggaacaggaattcgcgatgaaccgtcagctg
ttcctcacggaacagggctatgcctataaaatcatcaagcgcggcgactgggacattctt
atgaggacgcccgaggaactcgccgcaagagcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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