KEGG   Francisella tularensis subsp. holarctica FTT_1: DA46_129
Entry
DA46_129          CDS       T03713                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
ftc  Francisella tularensis subsp. holarctica FTT_1
Pathway
ftc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ftc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DA46_129 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ftc03019]
    DA46_129 (rnr)
   03016 Transfer RNA biogenesis [BR:ftc03016]
    DA46_129 (rnr)
Enzymes [BR:ftc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     DA46_129 (rnr)
Messenger RNA biogenesis [BR:ftc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DA46_129 (rnr)
Transfer RNA biogenesis [BR:ftc03016]
 Prokaryotic type
  tRNA degradation factors
   DA46_129 (rnr)
SSDB
Motif
Pfam: RNB S1 RNase_II_C_S1 Ras OB_RNB
Other DBs
NCBI-ProteinID: AJI50364
UniProt: A0A0B6DSW7
Position
complement(124687..126939)
AA seq 750 aa
MSKYSIHNDPNKDIEAQKYENPIPSREVILNYIRDVKLPVSIENIANALEIFKKNLFEGL
VNRLGAMVRDGQLEKDRSYYNLPEMAPIYITSKVTADRDSRLELFSHTLNTKVGIVSHQA
KMVMVGDEVTAKVLGLNKRGRIDAEIKTIVTRAQKTVTGYYYKSFDCDFIKPISKSIISD
IVLLPPKQKIEHNSLIEAEIIVYPSISSAAVAKFKQEVEAVSPVKEAMMMTTQKYDLIEQ
WSKKALRYLDNISDDVVVGNRVDLRNQHFVTIDGEDAKDFDDAVYAHKTKSGSWKLYVAI
ADVSNYVEKDSALDLDAKRRSTSVYFPGYVIPMLPEKLSNGLCSLRPNEDRYSLVCEMNI
SKEGKLSRYKFYSAVINSKARLTYTEVAKLLEKKQNTIVENTPELVPNIFDLYELYKVLH
QARQERGAIDFDTVETQIILDEHNHIESIVPRHRNDAHRLIEECMLVANVAAAKFTIKHK
KTSPFRVHSEPKEDRMETLKKYLAKHGIHLAHGKNGKVTPKALAQMLDSIKDRPDYDDIR
MMTLRSMNQAVYSINNDGHFGLAYSEYTHFTSPIRRYPDLVVHRIIKSIIGEYEHGAADY
KPSELANICENASDQERNADAASKQVENWLKCYFMQDYIGHILEAQIKHVNGLGLFAELK
DMYIEGLIHVSAIPGDYYIYDEAKDILIGKRTHKVYKIGQDITVRVVRADLERIHIDFEL
YDPRKPFAENSSDKPFAKKQKNLKKLKRRK
NT seq 2253 nt   +upstreamnt  +downstreamnt
gtgagtaagtacagcatacataatgatccgaataaggatattgaagcgcaaaaatatgaa
aatccaattccaagtagggaagtgattttaaattatataagagatgtaaaacttcctgta
agcattgaaaatatagcaaatgctttagagatttttaaaaaaaatcttttcgaaggtctt
gtaaatcgtttgggtgcaatggttagagatggtcagctagagaaggatagatcatattat
aatttgccggaaatggcgccaatatatatcacatctaaagttactgcagatagagattct
cgtttagagctatttagccatactctaaatacaaaggtaggtatagtatctcatcaagca
aaaatggtaatggttggtgatgaggtaactgcaaaagttcttgggcttaataagcgtggt
cgaatagatgctgaaattaaaaccatagtgacaagagctcagaagacagtcacgggctat
tattataagagctttgattgtgattttattaagccgataagcaaaagcataataagtgac
atagtgctattaccaccaaagcaaaaaatagagcataactctttaatagaagctgagatt
attgtttatcctagtataagtagtgcagctgttgctaaatttaagcaagaggtcgaagca
gtatctccagttaaagaagcgatgatgatgacaacacagaagtatgatttaattgagcag
tggagtaaaaaggctttacgctatttagataatatttctgatgacgtggttgttggcaac
agggttgatctacgtaatcaacactttgtaacaattgatggtgaagatgctaaggatttt
gatgatgcagtttatgcacataagactaaaagtggtagttggaagttatatgtagcaatt
gcagatgtctcaaactatgttgagaaagattcagctttggatttagacgctaagcgtcgt
tctacttcagtgtatttccctggttatgtgataccaatgctaccagagaaattatcaaat
ggtttatgttcattaagaccaaacgaagatagatattccttagtctgtgagatgaatatt
agtaaagaaggtaaactttctaggtataagttttattctgctgtaataaactcaaaggca
cgcttaacttatacagaagttgctaaacttttagaaaagaaacaaaacactatagttgag
aatactcctgagctagtacctaatatatttgatttatacgagttgtataaagtacttcac
caagctaggcaagaacgaggtgctatagactttgatacagttgaaacacagataattctt
gatgagcataatcatattgaatcaattgtgccaagacatcgtaatgatgcacataggctt
attgaagagtgtatgcttgttgctaacgttgcagcagctaagtttactattaagcataaa
aagacatcaccatttagagttcatagtgagcctaaagaagatagaatggaaactcttaag
aagtatcttgctaagcatggtatacatcttgctcatggtaagaatggtaaagtgactccc
aaagctttagcacaaatgctagatagtataaaagatcgtcctgattatgatgatattcgg
atgatgactttacgtagtatgaatcaggccgtatatagcataaataatgatggacacttt
ggactagcatatagtgaatatacgcattttacctcaccaattcgtagatatccagattta
gtagtacacagaataataaaatcaattattggtgaatatgaacatggtgctgctgattat
aaaccttctgaattggcaaatatttgtgaaaatgcctctgatcaagagcgaaatgctgat
gcagcctctaagcaagttgagaattggttgaagtgctactttatgcaagactacattggt
catatacttgaagctcaaattaagcatgttaatggtttaggtctttttgctgaactaaaa
gatatgtacatagaaggtctgatacatgtatcagctattcctggtgattactatatttat
gatgaagccaaagatatattaattggtaaacgaacccataaagtctataaaattggtcaa
gatattacagtaagagttgttcgagcagatctcgaaagaattcatatagattttgagctg
tatgatccacgtaagccatttgctgagaatagctcagataagccatttgcaaaaaaacaa
aaaaacttaaaaaagctaaaaagaagaaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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