KEGG   Francisella tularensis subsp. novicida U112: FTN_1538
Entry
FTN_1538          CDS       T00432                                 
Symbol
groEL
Name
(GenBank) chaperonin GroEL (HSP60 family)
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ftn  Francisella tularensis subsp. novicida U112
Pathway
ftn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ftn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FTN_1538 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ftn03019]
    FTN_1538 (groEL)
   03110 Chaperones and folding catalysts [BR:ftn03110]
    FTN_1538 (groEL)
   03029 Mitochondrial biogenesis [BR:ftn03029]
    FTN_1538 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ftn04147]
    FTN_1538 (groEL)
Enzymes [BR:ftn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     FTN_1538 (groEL)
Messenger RNA biogenesis [BR:ftn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     FTN_1538 (groEL)
Chaperones and folding catalysts [BR:ftn03110]
 Heat shock proteins
  HSP60 / Chaperonin
   FTN_1538 (groEL)
Mitochondrial biogenesis [BR:ftn03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    FTN_1538 (groEL)
Exosome [BR:ftn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   FTN_1538 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   FTN_1538 (groEL)
  Exosomal proteins of breast cancer cells
   FTN_1538 (groEL)
  Exosomal proteins of colorectal cancer cells
   FTN_1538 (groEL)
  Exosomal proteins of bladder cancer cells
   FTN_1538 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1 Lar_N
Other DBs
NCBI-ProteinID: ABK90403
UniProt: A0Q838
Position
complement(1636881..1638515)
AA seq 544 aa
MAAKQVLFSDEARAKMLDGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQIVKEVASKTADVAGDGTTTATVLAQALLTEGLKAVAAGMNPMDLKRGI
DKATAKLVEELKALSKPCSDPKSIEQVGTISANSDATVGKLIADAMAKVGKEGVITVEEG
KGFEDELDVVEGMQFDRGYLSPYFATNQENMTTDLENPYILIVDKKISNIRDLLPVLEGV
SKSGRALLIIAEDVESEALATLVVNNMRGVVKVCAVKAPGFGDRRKAMLEDIATLTGATF
VSEDLSMKLEETNMEHLGTASRVQVTKDNTTIIDGAGEKEAIAKRINVIKANIAEANSDY
DREKLQERLAKLSGGVAVIKVGAVTEAEMKEKKDRVDDALHATRAAVEEGIVAGGGVALI
RAQKALDGLTGENDDQNHGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGNYGYNA
ANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMVGEIKEAAPAMPMGGGMGGM
PGMM
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggctgcaaaacaagttttattttcagatgaagctcgtgcaaaaatgctagatggtgtt
aacacactagcaaatgctgtaaaagttactttaggtccaaaaggtcgtaatgttgtttta
gataaatcatttggcgcgccaactatcactaaagatggtgtatctgttgctaaagaaatt
gaactagaagataagtttgagaatatgggtgctcagatagttaaggaagtagcttcaaag
acagctgatgttgctggtgatggtactactacagctactgtacttgctcaggcattatta
acagaaggtctaaaagctgttgctgcgggtatgaatcctatggatctaaaaagaggtatc
gacaaagcaactgctaagttagttgaagaattaaaagcactttctaaaccatgttcagat
ccaaaatcaattgagcaagttggtactatctctgctaactctgatgctactgtaggtaag
cttatcgctgatgcaatggcaaaagttggtaaagaaggtgtgattacagttgaagaaggc
aaaggctttgaagatgagcttgatgtagttgaaggtatgcagtttgatagaggttatcta
tctccgtattttgcaacaaatcaagagaatatgactactgatttagagaatccatatatt
ctaatagttgataagaagatctctaatatccgcgatttattaccggtattagaaggtgtt
tctaaatctggtagagcgttactaataatagctgaagatgtagaaagtgaagctctagct
actttagttgtaaataatatgcgtggcgtagttaaagtatgtgctgtcaaagctcctggc
tttggtgatagaagaaaagctatgctagaagatatcgctaccctaactggagctacgttt
gtatcagaagacctaagcatgaagttagaagaaactaacatggagcatttaggtacggct
agtagagtacaagtaacaaaagataatacaacaattattgatggtgctggtgaaaaagaa
gctatcgctaaacgaataaatgtaatcaaagctaatattgctgaagctaactctgattat
gatcgtgagaagctgcaagaaagattggctaaactttctggcggtgttgcggttatcaaa
gttggcgctgttacagaagctgagatgaaagagaagaaagatcgtgtcgatgatgcttta
catgctactcgtgcggctgtagaagaaggtattgttgctggtggtggcgttgctttaatt
agagcacaaaaagcattagatggcttaacaggtgaaaatgacgatcaaaaccatggtata
gcgttacttagaaaggcaatagaagctcctctaagacagatagtatcaaatgctggcggt
gagtcttctgtagttgttaaccaagttaaagctaatcaaggtaactatggttataatgct
gcaaatgatacttatggtgatatggttgagatgggtattttagatcctactaaagttacg
cgttcagctctgcaacatgctgcttcaattgctggtcttatgattacaacagaggctatg
gttggtgaaatcaaagaagctgctccagctatgcctatgggcggtggcatgggcggtatg
ccgggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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