KEGG   Francisella tularensis subsp. holarctica PHIT-FT049: X557_00735
Entry
X557_00735        CDS       T03033                                 
Name
(GenBank) ribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
fto  Francisella tularensis subsp. holarctica PHIT-FT049
Brite
KEGG Orthology (KO) [BR:fto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fto03016]
    X557_00735
Enzymes [BR:fto01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     X557_00735
Transfer RNA biogenesis [BR:fto03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    X557_00735
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-ProteinID: AHH45709
Position
141392..143248
AA seq 618 aa
MQKNSLVIFKSKPAKVINLLDKKIEIETLDGKNIKLPAKSVQLLVESEKYFELESLKELE
IAELEMTWELLQEQQQTSVEELCELLFESIGVNQAYTVWLLVSEGEYFSFNDDFSINIHS
QEQKNAIVRDKQEKLKKEQELNDFIERLNNKTFNEDDRKFLKEIEALATLKTNKCRFFKY
LNMEESENSAYKLLLDIGYCDEFFNPYLYRYGAELEHNSAEFNYNSKSDNQRVDLTHLKA
YAIDDEGSNDPDDAISWDSQKNKMWVHISDPSSSISFGDEVDLQARARGSNLYVPEQIVM
MLPPQATAKLGLGLQEVSPAVSVGFRIDEQGDIHDIEICFSNIKVTRYSYEFVEENMHTL
ELGDIVSYAKYFTDKRLSKGAVELDFPEIKISLDANKNVKLTDLPRLNSRTLVRDTMLMA
GVAVGQFCIKNNISVSFSTQPEHDLGQDGLENIDSIADMFAKRKKLQRGRYSTQPSMHAG
MGLEAYVQVTSPLRRYLDLIVHYQLRNFLQHKEMISAQEIDNIIAQVDIPIKSNRQTERF
SNSHWKLVYLIQNPDLEFQATVIEKLEKSRLMVSIAALAMTKKLSVSGKYDLNDQIKLQN
TSVNLVTQEAFFRVIEEN
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgcaaaaaaattctctagtaatatttaaatctaaaccagcaaaggttattaatctctta
gataaaaaaattgagattgagactctcgatggtaaaaatattaagttacccgcaaagagt
gttcaattacttgtagagtcagaaaagtattttgaacttgaaagtttaaaagagctagaa
atagctgaacttgaaatgacttgggaattattacaagagcaacaacaaacatctgttgaa
gaactatgtgagttactttttgaatctataggggtaaatcaggcttataccgtgtggctt
ttagtttcagaaggagagtattttagctttaatgatgattttagtatcaatattcattca
caagagcaaaaaaatgcaatagttagagacaaacaagagaaacttaaaaaagagcaagaa
cttaatgatttcatagagcgtttaaacaataaaacttttaatgaagatgataggaaattt
cttaaggaaatagaagctctagcaacacttaaaactaataagtgtcgtttttttaagtac
ttaaacatggaggagtctgagaatagtgcgtataaattgcttttggatattggctattgt
gatgagttttttaacccttatttatacaggtatggtgctgagttagaacataattctgca
gagtttaactacaattctaaatcagataaccagcgagtagatctgacacatttaaaggct
tatgctatagatgatgaaggtagtaatgatcctgatgatgcaattagttgggatagccaa
aaaaataaaatgtgggtacatatctcagatccttcttctagtattagttttggtgatgag
gttgatcttcaagctagagcacgaggctcaaatttatatgtgccggaacagatagtcatg
atgttacctcctcaagcaacagcaaaattaggcttaggcttacaggaggtatctcctgca
gtatctgtaggatttaggattgatgagcaaggtgatatccatgatattgaaatatgcttt
agtaatataaaagttacacgatattcttatgaatttgttgaagaaaatatgcatacttta
gagcttggcgatatagtaagttatgcaaaatatttcactgataagcgtttatctaaaggt
gcagttgagcttgatttcccagagataaagatatcattagatgctaataaaaatgttaaa
ttaactgatttaccacgtttaaactcaaggacacttgtacgagatacaatgctaatggct
ggtgttgcagtaggacagttttgtattaaaaataatattagtgtatccttttctacacag
cctgaacatgatcttggacaagatggtttagagaatatcgattcaatagctgatatgttt
gcaaaacgcaaaaaactccaaagaggcagatattctacacaacctagtatgcatgcaggg
atgggattagaagcctatgtacaagtgactagtccattgagaagataccttgatttgatt
gtacactatcagttacgtaattttctgcagcataaagagatgataagtgctcaagagatt
gataacataattgctcaagttgatattcctataaaatcaaatagacaaactgagcgtttc
tcaaattcacactggaagttggtttacctaatccaaaatcctgacctggaatttcaagcg
acagttattgagaaattagaaaaaagtagattaatggtttctattgcagctttagcgatg
actaaaaaactttctgtcagcggtaagtatgatttaaatgatcaaataaagttacaaaac
acctcagtaaaccttgttacacaagaggctttctttagagttattgaagaaaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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