KEGG   Francisella tularensis subsp. tularensis NE061598: NE061598_08070
Entry
NE061598_08070    CDS       T01938                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ftr  Francisella tularensis subsp. tularensis NE061598
Pathway
ftr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ftr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NE061598_08070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ftr03021]
    NE061598_08070
   03019 Messenger RNA biogenesis [BR:ftr03019]
    NE061598_08070
Transcription machinery [BR:ftr03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     NE061598_08070
Messenger RNA biogenesis [BR:ftr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NE061598_08070
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT AAA ResIII AAA_22 DUF3086
Other DBs
NCBI-ProteinID: ADA79085
Position
1425598..1426860
AA seq 420 aa
MNLNELKYKSVNELMDIAQSLDLESLRARKQELIFSILKYHADKGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRENEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEIGNGSNEDITARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVFPAISFD
RSGTRREELLTTPEELQKLWVLRKILGGMEDVQAMEFLTEKMKGSLTNEEFFETMKRGAI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaacttaaatgaattaaagtataaatctgttaatgagctaatggatatagctcaaagt
ctagatcttgagtcacttcgtgccagaaaacaagagctgatcttctcaattctaaagtac
cacgctgataaaggtgaagacatttatggtgaaggtattttagaagtcctacaagatggc
tatggctttctaagatcttctgatagctcgtacttcgcctctccagatgatatctatgtt
tcacctgcttttattagaaaactaaatctgcgtactggtgatagtattgtcggtaagatt
cgtccgcctcgtgaaaatgagaaatactttgctgtcaaacacatcgatagtgttaacttt
gattctccagaattagctagaaagaaaattttatttgagaacctgactcctgagtatgct
aaagaaaggctaactatggaaattggaaacggctcaaatgaggatattactgctagagtt
atagatttagcggcaccatttggtaaaggtcagcgtggcttgattgttgcaccacctaaa
actggtaagacaatcatgatgcaaaatatcgcaacgtctattgccaaaaatcatccagag
tgtaatctaatcatgctactaattgatgagcgtcctgaggaagttaccgaaatgcaacgc
tccgtgcgaggtgaggtagttgcatctacgtttgatgaaccagctgcacgccatgtccaa
ttagctgaaattgtaatcgaaaaagccaaaagattagttgagcacaaacaagatgtagta
atcttacttgactcaatcacaagactagctcgtgcatacaataccgtatctccagcgtct
ggtcgtgtactatctggtggtgtagaggcaaacgccttacaaaaaccaaaaagattcttt
ggtgctgcgcgtaatactgccgaaggtggtagcttgacaatcattgcaactgctcttgtc
gaaactggttcaaagatggatgaagttatctttgaagaattcaaaggtacaggtaacatg
gagcttcatcttgatcgtaagattgctgagcgccgcgtcttccctgctattagctttgat
agatctggtacacgtagagaagaactacttactactccagaagagctacaaaaactttgg
gtgctgcgtaagattcttggtggtatggaagatgtccaagctatggaattcttaacagag
aaaatgaaaggctcactaactaatgaagaattctttgaaactatgaaaagaggcgctatt
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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